Gene Psyr_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0282 
Symbol 
ID3365758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp300942 
End bp301616 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID637650625 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_233393 
Protein GI66043552 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTT TTCTGAACCT GTTTTCCAAT GTCGACTGGT ACGAGATCTG GGTGGCCACT 
GGCGACACGC TGATCATGCT GGGTGTATCG CTCGGTTTCA CCATCCTGCT CGGCCTGCCG
CTGGGCGTGC TGATGTTTCT CACCTCGCCG CGTCAGTTGC TGGAGCACAA GCAGCTGTAT
GCGACGGTCG GGGTGATCGT CAACATGCTG CGCGCGCTGC CGTTCATCAT CCTGCTGATC
GTGATGATGC CGTTGACCGA GATCATTACC GGTACGTCAC TGGGTATCCT CGGCACCTTG
CCGCCGCTGA TCGCCGGCGC CACGCCGTTC TTTGCGCGTC TGGTAGAGAC CGCACTGCGC
GAAGTGGATC GCGGCATCAT CGAAGCCACG CAGGCCATGG GCGCGACGAC TCGGCAGATC
ATCGTCAAGG CGCTGTTGCC CGAGGCGCGC CCCGGCATTC TGGCGGCGAT CACGGTGACC
GCCATTGCGC TGGTGTCGTT CACGGCCATG GCCGGTGCCG TGGGCGCTGG CGGGCTGGGC
GACCTGGCGA TCCGTTATGG TTATCAACGA TTCCAGAACG ATGTGATGTT CGTGACGGTC
GTATTGTTGC TGGTGCTGGT GCAGATTCTG CAGACCATCG GCGACAGACT GGTCGCGCAT
TTCACACATC GTTGA
 
Protein sequence
MDAFLNLFSN VDWYEIWVAT GDTLIMLGVS LGFTILLGLP LGVLMFLTSP RQLLEHKQLY 
ATVGVIVNML RALPFIILLI VMMPLTEIIT GTSLGILGTL PPLIAGATPF FARLVETALR
EVDRGIIEAT QAMGATTRQI IVKALLPEAR PGILAAITVT AIALVSFTAM AGAVGAGGLG
DLAIRYGYQR FQNDVMFVTV VLLLVLVQIL QTIGDRLVAH FTHR