Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0282 |
Symbol | |
ID | 3365758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 300942 |
End bp | 301616 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637650625 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_233393 |
Protein GI | 66043552 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCTT TTCTGAACCT GTTTTCCAAT GTCGACTGGT ACGAGATCTG GGTGGCCACT GGCGACACGC TGATCATGCT GGGTGTATCG CTCGGTTTCA CCATCCTGCT CGGCCTGCCG CTGGGCGTGC TGATGTTTCT CACCTCGCCG CGTCAGTTGC TGGAGCACAA GCAGCTGTAT GCGACGGTCG GGGTGATCGT CAACATGCTG CGCGCGCTGC CGTTCATCAT CCTGCTGATC GTGATGATGC CGTTGACCGA GATCATTACC GGTACGTCAC TGGGTATCCT CGGCACCTTG CCGCCGCTGA TCGCCGGCGC CACGCCGTTC TTTGCGCGTC TGGTAGAGAC CGCACTGCGC GAAGTGGATC GCGGCATCAT CGAAGCCACG CAGGCCATGG GCGCGACGAC TCGGCAGATC ATCGTCAAGG CGCTGTTGCC CGAGGCGCGC CCCGGCATTC TGGCGGCGAT CACGGTGACC GCCATTGCGC TGGTGTCGTT CACGGCCATG GCCGGTGCCG TGGGCGCTGG CGGGCTGGGC GACCTGGCGA TCCGTTATGG TTATCAACGA TTCCAGAACG ATGTGATGTT CGTGACGGTC GTATTGTTGC TGGTGCTGGT GCAGATTCTG CAGACCATCG GCGACAGACT GGTCGCGCAT TTCACACATC GTTGA
|
Protein sequence | MDAFLNLFSN VDWYEIWVAT GDTLIMLGVS LGFTILLGLP LGVLMFLTSP RQLLEHKQLY ATVGVIVNML RALPFIILLI VMMPLTEIIT GTSLGILGTL PPLIAGATPF FARLVETALR EVDRGIIEAT QAMGATTRQI IVKALLPEAR PGILAAITVT AIALVSFTAM AGAVGAGGLG DLAIRYGYQR FQNDVMFVTV VLLLVLVQIL QTIGDRLVAH FTHR
|
| |