Gene Dred_2653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2653 
Symbol 
ID4958093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2874147 
End bp2874821 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content44% 
IMG OID640181834 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001113984 
Protein GI134300488 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATG AAATTTTTTC CCATTTATCC AGCCTTTCAC CGGAAATCAT CAAAGCCACC 
TGGGACACCT TCTACATGAC AATGGTATCA GTGATTCTTT CCTCGGTATT AGGCATTCCC
CTTGGAGTTA TTTTAGTGAT TACCGACAAA GGCCATATTA AAGAAAATTT GGCATTGAAC
CGGGTCCTGG GATCCATCAT TAATATTTTT CGATCTTTCC CCTTCATTAT CTTGTTACTG
GCTCTGGTTC CCTTTACCCG TTTGGTTGTT GGAACTACCA TTGGAACCAC CGCAGCCATT
GTACCCCTAA CCGTTGCCTC GGCCCCCTTT GTGGCTAGAA TGATAGAAAC TTCTTTAAAA
GAAGTGAGCT GGGGTGTGGT GGAGGCTTCT TTGGCAATGG GAGCCAGTAC CTGGCAGATT
ATTCGTAAAG TGTTATTACC CGAAGCCCTA CCCGGTATTA TTTTAGGTAC GACCATTACT
GCCATAGCTG TGATTGGTTA TTCTGCAATG GCAGGTGTCG TGGGAGGAGG TGGCCTCGGG
GACCTGGCGA TTCGTTACGG TTATATGCGT TTTGATGCGG TGGTAATGGT AACCACCGTA
GTTATCTTGA TTATTATGGT GCAAATTATT CAATCCCTGG GAAACATATT TGCCGATAAA
TTTAATAAAA ACTAG
 
Protein sequence
MSNEIFSHLS SLSPEIIKAT WDTFYMTMVS VILSSVLGIP LGVILVITDK GHIKENLALN 
RVLGSIINIF RSFPFIILLL ALVPFTRLVV GTTIGTTAAI VPLTVASAPF VARMIETSLK
EVSWGVVEAS LAMGASTWQI IRKVLLPEAL PGIILGTTIT AIAVIGYSAM AGVVGGGGLG
DLAIRYGYMR FDAVVMVTTV VILIIMVQII QSLGNIFADK FNKN