Gene Shel_25820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25820 
Symbol 
ID8396470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2853410 
End bp2854120 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content58% 
IMG OID644987325 
ProductABC-type metal ion transport system, permease component 
Protein accessionYP_003144936 
Protein GI257065264 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.961008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTG CGACTCATTC CCTGCAGGAA ATCATCGCGA GCGCGTTTTC GGCCGAGGTC 
TGGGCGCTTT TGGGCCCTGC GTGCCTGGAT ACGCTGTACA TGATTCTCAT GGCCACCGTT
CTCACGTTCG GATTTGGAAC GCTGATCGGT ATCGTACTGG CATGGACGAA CGCGACGGGA
CTTGATTCCC GGCCGGCGTT CTACCAGCCC CTGAGCGCGC TCATCAATGC GCTGCGCTCT
CTGCCTTCGA TGATCATGAT TATCCTCACG CTGCCGCTGG CTCGTGCCAT CACGGGCAAG
GGCTACGGTG CCAACGCTTG CATCATTGCT TTGGCCATGA GCTGCATTCC TATGTGCGCG
CGTCTCGTCG AGACGGCGTT GCTCGAAGTG GACCGAGGCA AGATTGAAGC GGCAAAGGCT
ATGGGCGCCT CCAACACACG CATCATGTTC ACGGTGGTGC TGCCTGAGGC GGTGCCATCG
ATCTTCCGCA GCTTCGGCGT GGTTGTGATC GCCATATTGT CCATGACTGC CCTGGCGGGC
GCGTTCGGCG CGGGTGGCAT CGGCAACATT GCGGTGCAGT ACGGATTCAA CCGCTTCCGT
TACGACATTC TTATTGCGAC GGTGCTGATT CTGGTTGTGT TCGCTGAGCT GGTGCAACTG
ATGTTCGAAG GCATGGCACG TATGGTTCTT AAGCGTCGAA AGATGCTCTG A
 
Protein sequence
MTFATHSLQE IIASAFSAEV WALLGPACLD TLYMILMATV LTFGFGTLIG IVLAWTNATG 
LDSRPAFYQP LSALINALRS LPSMIMIILT LPLARAITGK GYGANACIIA LAMSCIPMCA
RLVETALLEV DRGKIEAAKA MGASNTRIMF TVVLPEAVPS IFRSFGVVVI AILSMTALAG
AFGAGGIGNI AVQYGFNRFR YDILIATVLI LVVFAELVQL MFEGMARMVL KRRKML