Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4540 |
Symbol | |
ID | 6278481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 618521 |
End bp | 619177 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615630 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001888283 |
Protein GI | 187919252 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.141892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAGT TGTGGCTTTC CGAACTCGCC GATGCGATTC GCGACACCAT TGTCATGGTC GGCGTGTCCG CATTCGTCGC GGCGCTAATC GGCATTCCTC TGGCGCTGGT GCTGGTCACG ACGACACGCG GCGGCATCTT TGAAAAGCGC GCGGTGAACA GCACGCTCGG TGCGCTCGTC AACGCGTTCC GTTCCACGCC CTTCATCATT CTGCTGGTTG CGTTGCTGCC GCTCACGCGT TTGCTGATCG GCACGACGAT CGGCGTATGG GCCGCGATCG TGCCGCTCAG TATCGCGGCG ATTCCGTTTT TCGCGCGTGT GGCCGAAGTG AGCCTGCGTG AAGTGGACCG CGGTTTGATC GAAGCCGCGC AGGCCATGGG CGCGCAGCGC CGCCACATCA TCTGGCATGT GCTGTTGCCC GAGGCGCTGC CGGGCATTCT CGGCGGCTTC ACGATTACCG TGGTGGCGAT GATCGGTTCC TCGGCGATGG CAGGGGCGGT CGGCGCCGGC GGCCTTGGCG ATCTGGCGAT CCGTTACGGC TACCAGCGTT TCGACACGAC GGTGATGGTG ACGGTGATCG TGCTGCTAAT CGCGATCGTC ACGGCGGTGC AGTTCGTCGG CGACCGGTTC GTGCGGCGGC TTGCGCAGCG GGCGTGA
|
Protein sequence | MSELWLSELA DAIRDTIVMV GVSAFVAALI GIPLALVLVT TTRGGIFEKR AVNSTLGALV NAFRSTPFII LLVALLPLTR LLIGTTIGVW AAIVPLSIAA IPFFARVAEV SLREVDRGLI EAAQAMGAQR RHIIWHVLLP EALPGILGGF TITVVAMIGS SAMAGAVGAG GLGDLAIRYG YQRFDTTVMV TVIVLLIAIV TAVQFVGDRF VRRLAQRA
|
| |