Gene Bphyt_4540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4540 
Symbol 
ID6278481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp618521 
End bp619177 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID642615630 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001888283 
Protein GI187919252 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.141892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGT TGTGGCTTTC CGAACTCGCC GATGCGATTC GCGACACCAT TGTCATGGTC 
GGCGTGTCCG CATTCGTCGC GGCGCTAATC GGCATTCCTC TGGCGCTGGT GCTGGTCACG
ACGACACGCG GCGGCATCTT TGAAAAGCGC GCGGTGAACA GCACGCTCGG TGCGCTCGTC
AACGCGTTCC GTTCCACGCC CTTCATCATT CTGCTGGTTG CGTTGCTGCC GCTCACGCGT
TTGCTGATCG GCACGACGAT CGGCGTATGG GCCGCGATCG TGCCGCTCAG TATCGCGGCG
ATTCCGTTTT TCGCGCGTGT GGCCGAAGTG AGCCTGCGTG AAGTGGACCG CGGTTTGATC
GAAGCCGCGC AGGCCATGGG CGCGCAGCGC CGCCACATCA TCTGGCATGT GCTGTTGCCC
GAGGCGCTGC CGGGCATTCT CGGCGGCTTC ACGATTACCG TGGTGGCGAT GATCGGTTCC
TCGGCGATGG CAGGGGCGGT CGGCGCCGGC GGCCTTGGCG ATCTGGCGAT CCGTTACGGC
TACCAGCGTT TCGACACGAC GGTGATGGTG ACGGTGATCG TGCTGCTAAT CGCGATCGTC
ACGGCGGTGC AGTTCGTCGG CGACCGGTTC GTGCGGCGGC TTGCGCAGCG GGCGTGA
 
Protein sequence
MSELWLSELA DAIRDTIVMV GVSAFVAALI GIPLALVLVT TTRGGIFEKR AVNSTLGALV 
NAFRSTPFII LLVALLPLTR LLIGTTIGVW AAIVPLSIAA IPFFARVAEV SLREVDRGLI
EAAQAMGAQR RHIIWHVLLP EALPGILGGF TITVVAMIGS SAMAGAVGAG GLGDLAIRYG
YQRFDTTVMV TVIVLLIAIV TAVQFVGDRF VRRLAQRA