Gene Rfer_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1771 
Symbol 
ID3960862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1906953 
End bp1907618 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID637916594 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_523031 
Protein GI89900560 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAA CCTTCACCCC CCAGTTGCTG GAACTGTTCG CCTCGTCGCT GTGGGAGACG 
CTGGTCATGG TGGCCATTTC GGGTGCCGTG GGCGCCCTGC TGGGCACGCC GCTGGGCGTG
TACCTGCACC TGAGCGGCCG CGGCGGCGTG CTGGAGAACC TGCCGCTGAA CCACATCGTC
GGCACCACCG TCAACGCGGT GCGCTCCACG CCTTTCATCA TCCTGCTGGT GGCCATCATC
CCGTTCACGC GCTTCATCAC CGGTTCCTCC ATCGGCACGG CAGCCGCGGT GGTGCCGCTC
ACCGTGGCGG CGGCGCCCTT TGTGGCCCGG CTGATCGAGA CCGCGCTGCG CGAGGTGGAC
CATGGGCTGG TGGAAGCGGC GCTGGCCATG GGCGCCACCA CGCGCCAGAT CGTGTTCAAG
GTGCTCTTGC CCGAAGCCCT GCCTGGCATC GTGGCGGCGC TGACCATCAC CCTGGTGAGC
CTGACCGGCT ACTCGGCCAT GGCCGGAGCG ATTGGCGGTG GCGGCCTGGG TGACCTGGGC
ATCCGCTACG GCTACCAGCG TTTTTTGCCC GAGGTGATGC TGGCTGTGGT GCTGGTGCTG
ATTGTGTTTG TGCAGGCGGT CCAAAGCGCG GGCGACTGGG CGGTGCGGCG CATCAGCCAT
CGCTAA
 
Protein sequence
MFETFTPQLL ELFASSLWET LVMVAISGAV GALLGTPLGV YLHLSGRGGV LENLPLNHIV 
GTTVNAVRST PFIILLVAII PFTRFITGSS IGTAAAVVPL TVAAAPFVAR LIETALREVD
HGLVEAALAM GATTRQIVFK VLLPEALPGI VAALTITLVS LTGYSAMAGA IGGGGLGDLG
IRYGYQRFLP EVMLAVVLVL IVFVQAVQSA GDWAVRRISH R