Gene Ping_3537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3537 
Symbol 
ID4624011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4354761 
End bp4355447 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content44% 
IMG OID639798653 
ProductABC transporter substrate binding inner membrane protein 
Protein accessionYP_944819 
Protein GI119947139 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0228117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTG ATTTAATGTC GAGTTGGTGG GGGGAGCATG AAGGTCTTCT GCAATTATTA 
CTCGAAGCGT TAGGTGAAAC GGTTGCGATG GTGTTCGCTT CCGGGTTTCT AGGATTTGTT
GTTGGCATTC CGGTGGGTAT TGTATTGCAC TTAAGCAAAA AAAACGGATT ACTTGAACAC
GATTTGCTTA ATAAAATATT GGGTATTGTG GTCAATATTG GTCGCTCTAT TCCCTTTATT
ATTTTGTTGG TGGCGATTAT TCCTTTTACG CGCTTTGTTG TGGGGACCAC AATAGGAACC
GCAGCGGCTA TTGTACCCCT GACTATTGGC GCTATTCCGT TTATTGCACG TCTTGTTGAG
GGGGCGTTAT TAGAAGTACC CTCAGGATTG GTCGAGGCTG CACAGGCGAT GGGTGCAAAA
CCGCAACAAA TTATTACTAA AGTACTTTTA CCGGAAGCAC TACCCGGAAT TATCAATGCG
GTTACTATTA CGCTTGTGAC CCTAGTGGGT TATTCGGCAA TGGCCGGTAC TGTGGGTGGC
GGTGGCCTTG GAGACGTTGG CATTCGTTAT GGCTACCAAC GCTTTGATGC TACCGTGATG
ATGATTACAG TGGTTATTTT AGTTTTTATC GTACAACTTA TTCAATCAAT TGGTGATCAC
TTAGTTAAGT CTGTGGATCA TCGCTAA
 
Protein sequence
MSFDLMSSWW GEHEGLLQLL LEALGETVAM VFASGFLGFV VGIPVGIVLH LSKKNGLLEH 
DLLNKILGIV VNIGRSIPFI ILLVAIIPFT RFVVGTTIGT AAAIVPLTIG AIPFIARLVE
GALLEVPSGL VEAAQAMGAK PQQIITKVLL PEALPGIINA VTITLVTLVG YSAMAGTVGG
GGLGDVGIRY GYQRFDATVM MITVVILVFI VQLIQSIGDH LVKSVDHR