Gene Pden_4307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4307 
Symbol 
ID4582857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1486668 
End bp1487342 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID639771614 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_918067 
Protein GI119387012 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCTA ACCTGATCCC GATCCTGTGG CAGGCGACGC TGCAAACGCT CTACATGGTC 
GCCATGTCCA CCCTGATCGG CACGCTGATC GGCGGGCCGC TGGGCGTATT CCTGGCCACC
TCGCGCCGGG GCGAACTGCT CTCGGCGCCC TGGCTGAACA CCACCCTCGG CCTGGTGGTG
AATGCGGCGC GCTCGACGCC CTTCATCATC CTGGTGGTGG CGATCATCCC GTTCACGCGG
CTGATCGCCG GCACCTCGAT CGGCACCACC GCCGCCATCG TGCCGCTGAC CATCGCCGCG
GCGCCCTTCA TCGCCCGCCT CATCGAGACC GCCATCCGCG AAGTCGATGC CGGCCTGATC
GAGGCCGCCC GCGCCATGGG CGCCACCCCC GGCCAGATCG TCCGCAAGGT GCTGATCCCC
GAGGCGATGC CCGGCATCAT CCTGGGCCTG ACGCTCGCCG TGGTCAGCCT GATCGGCTAT
TCCGCCATGG TCGGCGCGGT CGGCGGCGAG GGGCTGGGCG ATCTCGGCAT CCGCTACGGC
TACCAGCGCT TCATGCCCGA GGTGATGCTG GCCGTGGTCG TGATCCTGAT CGTGCTGGTG
CAACTGGTGC AGTCGGCCGG CGAATGGATC GCTGCCCGTT TCGACAAGCG CGCGCCCCGC
AACCGGGGCC GATAA
 
Protein sequence
MSANLIPILW QATLQTLYMV AMSTLIGTLI GGPLGVFLAT SRRGELLSAP WLNTTLGLVV 
NAARSTPFII LVVAIIPFTR LIAGTSIGTT AAIVPLTIAA APFIARLIET AIREVDAGLI
EAARAMGATP GQIVRKVLIP EAMPGIILGL TLAVVSLIGY SAMVGAVGGE GLGDLGIRYG
YQRFMPEVML AVVVILIVLV QLVQSAGEWI AARFDKRAPR NRGR