| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1556 |
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| Symbol | |
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| ID | 4810063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1885007 |
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| End bp | 1885717 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640106974 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001037975 |
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| Protein GI | 125974065 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTTGC TGGATACCCC AATTTGGGAG GTGATAAAAG GTTCTTTTGC ACCGGATATA
TGGGTAAGGC TGGTTCCCGC TGTTGGAGAA ACACTATATA TGACAGTAGT GTCTTCTATC
ATAATGCTGG TGTTCGGCCT TTTGCTCGGC ATTCTGCTTA CCGTAACCAA TCCGGACGGT
TTGGTGCCCA TGAAAATTTT ATATACCGGG TCGGGCTGGC TGATTAACGC ACTGCGTTCC
CTTCCCCAAA TGATCATGAT CATTCTGATG ATTCCGGTGG CTCGGCTTTT TTTCGGAAAA
TCTTACGGCA CCAACGCTTG CATCATATCC ATCGCTGCCA GCTGTATCCC CATGTATGCA
AGAATTGTCG AAAACAGTCT GCTTGAGATT TCAAAAGGAA AGATTGAGGC CGCAAAGTCC
ATCGGCAGCA CTAATTTTCA AATAATTTTT CGCATATTAA TTCCTGAAAC TTTACCTTCC
TTAATCCGTG GGTTTACAGT GGCTGTCATT GCCGTAATTT CCATGACCGC GCTTGCGGGT
ATGTTTGGAG CCGGAGGCAT CGGAGATATA GCAGTAAGGT TTGGCTACCA GCGTTTTCAG
CATGATGTTT TGTTTGCATC CGTCTATGTT TTGATTGCCC TTGTCCAACT GGTTCAGTGG
ATTGGAAACT TTACATCCAA GCAAATCCTG AAAAAAAGAA ATTTAATTTA A
|
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| Protein sequence | MSLLDTPIWE VIKGSFAPDI WVRLVPAVGE TLYMTVVSSI IMLVFGLLLG ILLTVTNPDG
LVPMKILYTG SGWLINALRS LPQMIMIILM IPVARLFFGK SYGTNACIIS IAASCIPMYA
RIVENSLLEI SKGKIEAAKS IGSTNFQIIF RILIPETLPS LIRGFTVAVI AVISMTALAG
MFGAGGIGDI AVRFGYQRFQ HDVLFASVYV LIALVQLVQW IGNFTSKQIL KKRNLI
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