| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0806 |
|---|
| Symbol | |
|---|
| ID | 9244651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 995041 |
|---|
| End bp | 995781 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003678756 |
|---|
| Protein GI | 297559782 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.602881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCA ACCCCGCCGA CGTCCTGCAC CTGGCCGCCG CCACCGGGGC GGCCGGACCC
TGGGACGCCG TCGTCGCGTT CGTCCAGGCC TGGCCCGCGA TGTGGCCCGA CCTGTGGCTG
GGCACCCTGG ACACCGTCTA CATGGTGTGG TGGGCCACCG TCGTCAGCGT CCTGTTCGGC
CTGCCGCTGG GCGTGCTGCT GGTGGCCACC GACCGGGGAG GGCTCATCCC CGCCCCCGCC
GTGCGCGCCG TGCTCAGCGC CGTCGTCAAC ATCGGCCGCT CCCTGCCGTT CATCGTCCTG
ATGGTGGCCG TGCTCTCCCT GACCCGCCTG CTGGTGGGCA CCACCCTGGG CCCCACGGCC
GCGATCGTAC CCCTGAGCAT CGGCGCGATC CCCTTCTTCG CCCGCCTGGT GGAGACCTCC
CTGCGCGAGG TGGACCGCGG GGTCGTGGAG GCCGCGCACG CCATGGGCAC CCGCCGCGTC
ACCATCGTGG GCAAGGTGAT GCTGCCCGAG GCCATGCCCG GCCTCATCGC GGGCCTGGTG
ATGACCGTGG TCACCCTCAT CTCCTACTCG GCGATGGCCG GAGCCATCGG CGGCGGAGGC
CTGGGCGACC TGGCCATCCG CGAGGGCTAC CAGCGCTTCA ACGACCACTA CCTGTGGGCC
ACCGTCATCC TGCTCATCGT CATCGTGCAG ATCGCGCAGA GCCTGGGCGA CCTGCTGGTG
CGCCGCCTGG CGCGGCGCTG A
|
|---|
| Protein sequence | MSTNPADVLH LAAATGAAGP WDAVVAFVQA WPAMWPDLWL GTLDTVYMVW WATVVSVLFG
LPLGVLLVAT DRGGLIPAPA VRAVLSAVVN IGRSLPFIVL MVAVLSLTRL LVGTTLGPTA
AIVPLSIGAI PFFARLVETS LREVDRGVVE AAHAMGTRRV TIVGKVMLPE AMPGLIAGLV
MTVVTLISYS AMAGAIGGGG LGDLAIREGY QRFNDHYLWA TVILLIVIVQ IAQSLGDLLV
RRLARR
|
|---|
| |