Gene Rpic_0791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0791 
Symbol 
ID6288199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp837499 
End bp838152 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID642624355 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001898374 
Protein GI187927887 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.302745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.367632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCTG ACCTGACCGA TCTGTTCCTG CCGGCTTTCT GGGAAACGCT GGCCATGGTG 
GGCGTGTCAG GCGGCATTGG CGCGCTGTTT GGCGTGCCGC TGGGCGTGCT GCTGTATCTG
ACGACCACGG GTGGCGTGCT GTCGGCACCG GTGTTCAACC GCGTGGCGGG CCTTGTCGTC
AATGCCGTGC GCTCGGTGCC GTTCATCATT CTGCTGGTCG CCGTGATTCC GTTCACCCGC
CTGCTGGCGG GCTCGTCCAT TGGCACCGCG GCGGCCATCG TGCCGCTGAC GATTGCTGCG
ATTCCGTTTG TTGCACGTCT GGTTGAGACT GCGCTCCGCG AAGTGGATCG TGGCCTGATT
GAAGCCGCGC AGTCCATGGG TGCGACGACC GGTCAGCTCG TCTACAAGGT GCTGCTGCCT
GAAGCGATGC CGGGCATCCT CGCCGGCCTG ACGATCACCT TCGTCAGCCT TGTCGGCTAC
TCGGCCATGG CCGGCACCAT CGGCGGCGGC GGCTTGGGCG ATCTGGGCAT CCGCTATGGC
TATCAACGTT ACGAATCGGA CATCATGCTG GCGGTTGTCG TCATCCTGAT CGTCTTTGTG
CAGGCGGTGC AATCGACGGG CGATTGGCTC GTGCGCCGCC TGAGCCACCG TTAA
 
Protein sequence
MWSDLTDLFL PAFWETLAMV GVSGGIGALF GVPLGVLLYL TTTGGVLSAP VFNRVAGLVV 
NAVRSVPFII LLVAVIPFTR LLAGSSIGTA AAIVPLTIAA IPFVARLVET ALREVDRGLI
EAAQSMGATT GQLVYKVLLP EAMPGILAGL TITFVSLVGY SAMAGTIGGG GLGDLGIRYG
YQRYESDIML AVVVILIVFV QAVQSTGDWL VRRLSHR