| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5261 |
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| Symbol | metI-2 |
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| ID | 1186946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5981244 |
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| End bp | 5981918 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396580 |
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| Product | D-methionine ABC transporter, permease protein |
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| Protein accession | NP_794992 |
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| Protein GI | 28872373 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGCTT TCCTGAACCT GTTTGCCAAC GTCGACTGGT ACGAGATCTG GGTCGCCACG
GGCGATACCC TGATCATGCT CAGTGTTTCG CTGGGTTTCA CTATTCTGCT CGGGCTGCCC
CTGGGCGTGC TGATGTTCCT GACATCGCCG CGTCAGTTGC TGGAGCATAA ACAGCTGTAC
GCCACGGTCG GTTTGATCGT GAACATGCTG CGCGCGCTGC CGTTCATCAT TCTGCTGATC
GTGATGATGC CGCTGACCGA AATCATCACT GGCACATCAT TGGGCATTCT CGGCACGCTG
CCGCCGCTGA TTGCCGGCGC CACGCCGTTT TTTGCGCGCC TGGTGGAAAC CGCATTGCGT
GAAGTGGATC GCGGCATCAT CGAAGCCACA CAGGCAATGG GCGCCACCAC CCGGCAAATA
ATCGTCAAGG CACTGCTGCC CGAAGCTCGC CCCGGCATTG TGGCGGCGAT TACCGTCACT
GCCATCGCGC TGGTGTCCTT CACCGCCATG GCGGGTGCGG TAGGTGCTGG CGGGCTGGGC
GATCTGGCCA TTCGTTACGG TTATCAACGC TTCCAGAACG ATGTGATGTT CGTGACGGTC
GTATTGTTGC TGGTACTGGT GCAGATTCTG CAGACCATCG GCGACAGACT GGTCGCACAC
TTCACCCACC GTTGA
|
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| Protein sequence | MDAFLNLFAN VDWYEIWVAT GDTLIMLSVS LGFTILLGLP LGVLMFLTSP RQLLEHKQLY
ATVGLIVNML RALPFIILLI VMMPLTEIIT GTSLGILGTL PPLIAGATPF FARLVETALR
EVDRGIIEAT QAMGATTRQI IVKALLPEAR PGIVAAITVT AIALVSFTAM AGAVGAGGLG
DLAIRYGYQR FQNDVMFVTV VLLLVLVQIL QTIGDRLVAH FTHR
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