Gene RPD_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3224 
Symbol 
ID4023731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3578541 
End bp3579206 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID637963426 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_570350 
Protein GI91977691 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCTG AACTCATCCG CATGATCGCG TGGTCGACGC TCGACACGTT GGCGATGGTC 
GGTCTCGCCG GGCTGTTCGG CACCTTGATC GGCCTGCCGC TCGGCATCTT TCTCGCCACC
AGCCGCGCCG GCGAATTGTT TCCCGCGCCG ACGGCAAATC GTATCGTCGG CGTGATCGTC
AACGCCACGC GCTCGACGCC GTTCATCATC CTGGTGGTCG CGATCGTGCC GCTGACCCGG
CTGATCGTCG GCACCTCGAT CGGCACTGCG GCGGCCACCG TGCCGCTGAC GATCGCGGCG
ATCCCGTTCA TCGCCCGCGT CATCGAGGCG GCGATCCGAG AAGTCGACCA CGGCCTGATC
GAGGCGGCTC GCGCATTCGG CGCAAGCCCG CTGCAGATCG TGCGCAAAGT GCTGCTGCCC
GAGGCGATGC CGGCGGTGAC GCTGGCGCTG ACGCTGACCA TCGTCAGCCT GCTCGGCTAT
TCGGCGATGG TCGGCGCCGT CGGCGGCGGC GGCCTCGGCG ACCTCGGCAT CCGTTACGGC
TATCAGCGCT TCATGCCGGA GGTGATGCTG ACGGTGGTGC TGGTGCTGAT CGCGCTGGTG
CAGGGCGTCC AGACGCTCGG CGACACGCTG GCGCGCAAGC TCGACCGCCG CACCCGCCGG
TCCTGA
 
Protein sequence
MSPELIRMIA WSTLDTLAMV GLAGLFGTLI GLPLGIFLAT SRAGELFPAP TANRIVGVIV 
NATRSTPFII LVVAIVPLTR LIVGTSIGTA AATVPLTIAA IPFIARVIEA AIREVDHGLI
EAARAFGASP LQIVRKVLLP EAMPAVTLAL TLTIVSLLGY SAMVGAVGGG GLGDLGIRYG
YQRFMPEVML TVVLVLIALV QGVQTLGDTL ARKLDRRTRR S