| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0428 |
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| Symbol | |
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| ID | 5135103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 456781 |
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| End bp | 457458 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640531886 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_001216383 |
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| Protein GI | 147675345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTTA ATACGATTGC ACAATGGTTT GCACTCAATA GTGACCTACT GTTAACCGCC
ACATGGCAAA CACTGTATAT GGTCGCGATT GCCGGTGCGG TGGGTTTTGC GCTCGGGATT
CCGCTAGGAG TGATTCTCCA TACCACCAAA AAAGAGGGCT TACTGGAAAA CCTACCGCTG
AACCGTGCGC TCGGCGCCGT GGTTAACATC GGTCGCTCGG TACCCTTTTT GGTGTTGATG
GTCGCCATCA TTCCTGTCAC CAAACTGATT GTCGGCACTT TTATCGGTAC CACTGCGGCC
ATTGTGCCAC TCACGATTGG GGCGATTCCG TTTGTAGCGC GCCTGATTGA GAGTGCGCTG
CTTGAAGTGC CAACCGGCTT AGTGGAAGCG GCGCAATCTA TGGGTGCGAC GCCACTACAA
ATCATTCGTA AGGTACTGCT GCCTGAAGCG CTACCGACGA TTTTAAACTC AGTCACGATT
ACTCTCGTGA CACTGGTCAG CTACTCAGCC ATGGCGGGTA CCGTTGGCGG TGGTGGTCTG
GGCGATGTGG CGATCCGCTA TGGATTCCAC CGTTACGACA TCACCATCAT GGCGGTCACT
GTGGTCATGC TGATTGTGCT GGTACAAATT ATTCAATCCA TCGGCGATGC GTTGGTACGC
CGCGTCGATC ATCGATAA
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| Protein sequence | MSFNTIAQWF ALNSDLLLTA TWQTLYMVAI AGAVGFALGI PLGVILHTTK KEGLLENLPL
NRALGAVVNI GRSVPFLVLM VAIIPVTKLI VGTFIGTTAA IVPLTIGAIP FVARLIESAL
LEVPTGLVEA AQSMGATPLQ IIRKVLLPEA LPTILNSVTI TLVTLVSYSA MAGTVGGGGL
GDVAIRYGFH RYDITIMAVT VVMLIVLVQI IQSIGDALVR RVDHR
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