More than 300 homologs were found in PanDaTox collection
for query gene PCC7424_3430 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011729  PCC7424_3430  two component transcriptional regulator, winged helix family  100 
 
 		 231 aa  475  1e-133  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011726  PCC8801_2339  two component transcriptional regulator, winged helix family  63.27 
 
 		 239 aa  301  6.000000000000001e-81  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2390  two component transcriptional regulator, winged helix family  63.27 
 
 		 239 aa  301  6.000000000000001e-81  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014248  Aazo_2678  winged helix family two component transcriptional regulator  54.15 
 
 		 240 aa  226  2e-58  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_4914  two component transcriptional regulator  53.91 
 
 		 238 aa  226  3e-58  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.095278 
 
 
-
 
NC_011729  PCC7424_4236  two component transcriptional regulator, winged helix family  47.58 
 
 		 241 aa  202  3e-51  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007604  Synpcc7942_0556  two component transcriptional regulator  46.49 
 
 		 237 aa  200  9.999999999999999e-51  Synechococcus elongatus PCC 7942  Bacteria  normal  0.451756  normal  1 
 
 
-
 
NC_014248  Aazo_2507  winged helix family two component transcriptional regulator  44.98 
 
 		 233 aa  191  8e-48  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_1917  two component transcriptional regulator  45.41 
 
 		 238 aa  187  1e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.332821 
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.73 
 
 		 231 aa  151  5.9999999999999996e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_013132  Cpin_1224  two component transcriptional regulator, winged helix family  38.6 
 
 		 227 aa  145  6e-34  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0117785  hitchhiker  0.00926138 
 
 
-
 
NC_011831  Cagg_0243  two component transcriptional regulator, winged helix family  41.15 
 
 		 235 aa  145  7.0000000000000006e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0646165  normal  1 
 
 
-
 
NC_014248  Aazo_0581  winged helix family two component transcriptional regulator  36.84 
 
 		 242 aa  144  1e-33  'Nostoc azollae' 0708  Bacteria  normal  0.296955  n/a   
 
 
-
 
NC_008740  Maqu_3596  two component transcriptional regulator  38.53 
 
 		 230 aa  144  1e-33  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_1878  two component transcriptional regulator  36.84 
 
 		 242 aa  144  2e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.559477 
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  38.94 
 
 		 230 aa  143  2e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.683455 
 
 
-
 
NC_007520  Tcr_0541  two component transcriptional regulator  39.13 
 
 		 230 aa  142  5e-33  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  36.36 
 
 		 234 aa  142  5e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_4207  two component transcriptional regulator, winged helix family  36.12 
 
 		 247 aa  142  5e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007513  Syncc9902_0308  two component transcriptional regulator  37 
 
 		 248 aa  142  6e-33  Synechococcus sp. CC9902  Bacteria  normal  0.030574  n/a   
 
 
-
 
NC_010001  Cphy_0154  two component transcriptional regulator  34.93 
 
 		 238 aa  141  7e-33  Clostridium phytofermentans ISDg  Bacteria  normal  0.644268  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  39.29 
 
 		 227 aa  140  9.999999999999999e-33  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_011884  Cyan7425_1115  two component transcriptional regulator, winged helix family  36.12 
 
 		 243 aa  140  9.999999999999999e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.0950226  normal  1 
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  38.6 
 
 		 231 aa  140  1.9999999999999998e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  hitchhiker  0.000343135 
 
 
-
 
NC_007516  Syncc9605_2384  two component transcriptional regulator  37.28 
 
 		 259 aa  140  1.9999999999999998e-32  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008312  Tery_0954  two component transcriptional regulator  35.96 
 
 		 243 aa  140  1.9999999999999998e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.0817018 
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  35.19 
 
 		 231 aa  140  1.9999999999999998e-32  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  37.33 
 
 		 227 aa  140  1.9999999999999998e-32  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_008819  NATL1_02061  two-component response regulator  36.56 
 
 		 248 aa  140  1.9999999999999998e-32  Prochlorococcus marinus str. NATL1A  Bacteria  normal  1  normal  0.540525 
 
 
-
 
NC_011726  PCC8801_2302  two component transcriptional regulator, winged helix family  35.24 
 
 		 243 aa  139  3e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2353  two component transcriptional regulator, winged helix family  35.24 
 
 		 243 aa  139  3e-32  Cyanothece sp. PCC 8802  Bacteria  normal  0.0794558  normal  1 
 
 
-
 
NC_008820  P9303_26531  two-component response regulator  35.96 
 
 		 248 aa  139  3e-32  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  34.36 
 
 		 230 aa  139  3.9999999999999997e-32  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_007604  Synpcc7942_1453  two component transcriptional regulator  35.68 
 
 		 244 aa  139  3.9999999999999997e-32  Synechococcus elongatus PCC 7942  Bacteria  normal  0.952418  normal  0.0249242 
 
 
-
 
NC_012793  GWCH70_0170  two component transcriptional regulator, winged helix family  36.56 
 
 		 232 aa  139  3.9999999999999997e-32  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  36.36 
 
 		 231 aa  139  4.999999999999999e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_007335  PMN2A_1500  two component transcriptional regulator  36.12 
 
 		 248 aa  139  4.999999999999999e-32  Prochlorococcus marinus str. NATL2A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_5611  two component transcriptional regulator, winged helix family  37 
 
 		 235 aa  138  7e-32  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.736991 
 
 
-
 
NC_013521  Sked_09580  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  35.65 
 
 		 244 aa  138  7.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.132168 
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  34.96 
 
 		 224 aa  138  8.999999999999999e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013169  Ksed_08590  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  36.24 
 
 		 239 aa  136  2e-31  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  0.857083 
 
 
-
 
NC_007577  PMT9312_0136  two component transcriptional regulator  35.04 
 
 		 248 aa  137  2e-31  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4285  two component transcriptional regulator, winged helix family  37.55 
 
 		 238 aa  137  2e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.83647  n/a   
 
 
-
 
NC_009523  RoseRS_0805  two component transcriptional regulator  35.11 
 
 		 229 aa  136  2e-31  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_3403  two component transcriptional regulator  35.5 
 
 		 236 aa  137  2e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_0841  two component transcriptional regulator, winged helix family  39.13 
 
 		 223 aa  136  2e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008816  A9601_01511  two-component response regulator  34.33 
 
 		 248 aa  137  2e-31  Prochlorococcus marinus str. AS9601  Bacteria  normal  1  n/a   
 
 
-
 
NC_008817  P9515_01621  two-component response regulator  35.47 
 
 		 248 aa  136  2e-31  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.367767  n/a   
 
 
-
 
NC_012669  Bcav_1240  two component transcriptional regulator, winged helix family  36.96 
 
 		 227 aa  136  3.0000000000000003e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal  1 
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  36.73 
 
 		 228 aa  136  3.0000000000000003e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_4913  two component transcriptional regulator  34.22 
 
 		 231 aa  136  3.0000000000000003e-31  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.121364 
 
 
-
 
NC_009091  P9301_01531  two-component response regulator  35.04 
 
 		 248 aa  136  3.0000000000000003e-31  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_1802  two component transcriptional regulator, winged helix family  36.52 
 
 		 232 aa  136  3.0000000000000003e-31  Jonesia denitrificans DSM 20603  Bacteria  normal  0.150286  normal  1 
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  35.93 
 
 		 231 aa  135  5e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.312171 
 
 
-
 
NC_007802  Jann_0092  two component transcriptional regulator  35.65 
 
 		 239 aa  135  6.0000000000000005e-31  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.586554 
 
 
-
 
NC_010001  Cphy_2121  two component transcriptional regulator  37.72 
 
 		 231 aa  135  6.0000000000000005e-31  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_5207  winged helix family two component transcriptional regulator  35.56 
 
 		 247 aa  134  9e-31  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  39.56 
 
 		 225 aa  134  9.999999999999999e-31  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_009616  Tmel_1516  two component transcriptional regulator  36.32 
 
 		 218 aa  134  9.999999999999999e-31  Thermosipho melanesiensis BI429  Bacteria  normal  0.346089  n/a   
 
 
-
 
NC_013521  Sked_09340  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.67 
 
 		 223 aa  134  9.999999999999999e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.217912  normal  0.763127 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  38.57 
 
 		 236 aa  133  1.9999999999999998e-30  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_01810  transcriptional regulatory protein  34.07 
 
 		 226 aa  133  1.9999999999999998e-30  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5311  two component transcriptional regulator  34.02 
 
 		 246 aa  133  1.9999999999999998e-30  Frankia sp. EAN1pec  Bacteria  normal  0.554395  normal  0.310406 
 
 
-
 
NC_012669  Bcav_1276  two component transcriptional regulator, winged helix family  36.32 
 
 		 242 aa  134  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.114994 
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  36.73 
 
 		 229 aa  134  1.9999999999999998e-30  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  36.56 
 
 		 228 aa  133  1.9999999999999998e-30  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_014212  Mesil_0142  two component transcriptional regulator, winged helix family  37.12 
 
 		 221 aa  133  1.9999999999999998e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.709604 
 
 
-
 
NC_009524  PsycPRwf_2160  two component transcriptional regulator  33.91 
 
 		 240 aa  132  3e-30  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  37.83 
 
 		 243 aa  132  3e-30  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal  1 
 
 
-
 
NC_007516  Syncc9605_2378  two component transcriptional regulator  34.62 
 
 		 262 aa  132  3e-30  Synechococcus sp. CC9605  Bacteria  normal  1  normal  0.936352 
 
 
-
 
NC_009253  Dred_0759  two component transcriptional regulator  34.22 
 
 		 223 aa  132  3.9999999999999996e-30  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00128917  n/a   
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  36.48 
 
 		 236 aa  132  3.9999999999999996e-30  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal  1 
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  35.53 
 
 		 237 aa  132  3.9999999999999996e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
NC_009767  Rcas_1176  two component transcriptional regulator  34.67 
 
 		 229 aa  132  3.9999999999999996e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.149936 
 
 
-
 
NC_009675  Anae109_4159  two component transcriptional regulator  34.63 
 
 		 230 aa  132  5e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.667277  normal  0.0359145 
 
 
-
 
NC_009012  Cthe_1408  two component transcriptional regulator  36.94 
 
 		 232 aa  132  5e-30  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  34.51 
 
 		 223 aa  132  5e-30  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_007908  Rfer_3646  two component transcriptional regulator  34.63 
 
 		 243 aa  132  5e-30  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  38.1 
 
 		 235 aa  132  5e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  35.06 
 
 		 228 aa  132  6e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_014158  Tpau_0093  two component transcriptional regulator, winged helix family  34.07 
 
 		 232 aa  132  6e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_2416  two component transcriptional regulator  35.4 
 
 		 255 aa  132  6e-30  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.0279623 
 
 
-
 
NC_009092  Shew_2206  two component transcriptional regulator  36.55 
 
 		 246 aa  132  6.999999999999999e-30  Shewanella loihica PV-4  Bacteria  normal  1  normal  0.121597 
 
 
-
 
NC_008345  Sfri_0485  two component transcriptional regulator, winged helix family protein  35.65 
 
 		 244 aa  131  6.999999999999999e-30  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.773776  n/a   
 
 
-
 
NC_011830  Dhaf_2159  two component transcriptional regulator, winged helix family  36.73 
 
 		 227 aa  132  6.999999999999999e-30  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00177162  n/a   
 
 
-
 
NC_009524  PsycPRwf_0196  two component transcriptional regulator  38.05 
 
 		 238 aa  131  7.999999999999999e-30  Psychrobacter sp. PRwf-1  Bacteria  decreased coverage  0.0000815382  hitchhiker  0.00535544 
 
 
-
 
NC_013510  Tcur_1461  two component transcriptional regulator, winged helix family  35.68 
 
 		 225 aa  131  7.999999999999999e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  0.616357  n/a   
 
 
-
 
NC_010506  Swoo_3978  two component transcriptional regulator  33.48 
 
 		 234 aa  131  7.999999999999999e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.832558 
 
 
-
 
NC_008699  Noca_3782  response regulator receiver  37.17 
 
 		 297 aa  131  7.999999999999999e-30  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  35.96 
 
 		 228 aa  131  9e-30  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  37.28 
 
 		 231 aa  131  9e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal  1 
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  36.56 
 
 		 237 aa  130  1.0000000000000001e-29  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.421984 
 
 
-
 
NC_007413  Ava_1498  two component transcriptional regulator  35.56 
 
 		 247 aa  130  1.0000000000000001e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  0.220919  normal  1 
 
 
-
 
NC_013161  Cyan8802_1963  two component transcriptional regulator, winged helix family  36.17 
 
 		 246 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.470012 
 
 
-
 
NC_013946  Mrub_0302  two component transcriptional regulator, winged helix family  35.68 
 
 		 221 aa  130  1.0000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6208  two component transcriptional regulator, winged helix family  36.12 
 
 		 226 aa  130  1.0000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_1936  two component transcriptional regulator, winged helix family  36.17 
 
 		 246 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  35.5 
 
 		 227 aa  131  1.0000000000000001e-29  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_009976  P9211_01421  two-component response regulator  35.62 
 
 		 258 aa  130  1.0000000000000001e-29  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  1  normal  0.341989 
 
 
-
 
NC_008686  Pden_2600  two component transcriptional regulator  35.65 
 
 		 239 aa  131  1.0000000000000001e-29  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.647835 
 
 
-
 
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