| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0092 |
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| Symbol | |
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| ID | 3932528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 86924 |
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| End bp | 87643 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637902433 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_508034 |
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| Protein GI | 89052583 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.586554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGA GCATGGACAT AGGCGCGCAT CTTCTGATCG TGGATGATGA TGAGCGTATC
CGCTCGCTCC TTCAGAAGTT CCTGATGCGC AACGGGTTCA TGGCGTCTGG CGCACGCGAT
GCCGGGCAGG CGCGTGTTCT TCTGGCGGGG CTGAGCTTCG ACATGATCGT GCTCGATGTG
ATGATGCCGG GTGAAGATGG GCTGAGCCTG TGTCGCGATA TCCGCGCGAC GTCTTCCACC
CCGATCCTGT TGCTGACAGC CAATGGCGAG CCCGATGACC GGATCGAGGG GCTGGAGGCC
GGGGCGGACG ATTACCTTTC CAAACCGTTC GAGCCCAAGG AATTGCTGCT GCGGATCAAC
GCGATCCTGC GCCGCATGCC CGCGCCGACC GAGGACGCGA CCGTGCCCCA GGTCATCCAC
CTTGGCCCCG TGCGCTATGA TATCGAGCGC GGTGAAATGT GGCAGGGCCA GGACCCCGTG
CGCCTGACCG CGACGGAGGC TGCGTTGATG CGGATCTTCG CGCATCAACC GGCGGAGGCA
CTGTCGCGGG GTGAGTTGGT GAGCCTTCTG AACCGCGACA AGGTGGGTGG AGAGCCGGTG
CAGGAACGGG CCGTAGACGT GCAGATCACA CGGCTGCGGC GCAAGATCGA GATGAACCCG
AAACAGCCCC GCTACCTGCA GACCGTGCGC GGAGCGGGCT ATATGCTGTC GCCTGATTGA
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| Protein sequence | MNMSMDIGAH LLIVDDDERI RSLLQKFLMR NGFMASGARD AGQARVLLAG LSFDMIVLDV
MMPGEDGLSL CRDIRATSST PILLLTANGE PDDRIEGLEA GADDYLSKPF EPKELLLRIN
AILRRMPAPT EDATVPQVIH LGPVRYDIER GEMWQGQDPV RLTATEAALM RIFAHQPAEA
LSRGELVSLL NRDKVGGEPV QERAVDVQIT RLRRKIEMNP KQPRYLQTVR GAGYMLSPD
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