Gene Xaut_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3403 
Symbol 
ID5423944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3789518 
End bp3790228 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID640882656 
Producttwo component transcriptional regulator 
Protein accessionYP_001418289 
Protein GI154247331 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCCCG AAGGCCATAT CCTGATCGTC GACGACGACG CGGAGATCCG GCGCCTCGCC 
GGCAAGTTCC TGCGCGAGCA TGGGCACAAG GTCACCACGG CCCAGGACGC ACGCGAGATG
CGCGAGGCGA TGAAGGCGGG GCCGGTGGAT CTCATCATCC TCGACATCAT GCTGCCGGGC
GCGAGCGGGC TCGACCTGTG CCGGGACATC CGCCGCACCT CCAGCGTGCC CATCATCATG
CTCACCGCGC GCGGCAGTGA CGTGGACCGC ATCGTGGGGC TGGAGCTGGG TGCGGATGAC
TATCTGTCGA AGCCGTTCAA TCCGCGCGAG CTGCTGGCGC GCATCCATGC GGTGCTGCGG
CGCATGCGGC CTTCCGGTGG CGCCGCGACC GGCGGCTCCC TGCTCAACTT CGCCGGCTGG
ACGCTCGACA CCCGCCGGCG CGAGCTCACC AATCCGGCGG CCGTCGTGGT GGACCTCTCC
ACCGGCGAAT ACGACCTGCT CCTGACCTTC CTCGAACACC CCCAAAGGGT ACTGACCCGC
GACCAGCTGA TGGACGCCGC CAAGAACCGC ACCGCCACGG GCTTCGACCG CGCCATCGAC
ATCCAGGTCA GCCGGCTGCG CAAGAAGCTT GAATCCCACG GCGGGCCGGA GATGGTGAAG
ACCGTGCGCG GCGCCGGTTA TTTCTTCGTC CCGGAGGTGG AACGCTCGTG A
 
Protein sequence
MSPEGHILIV DDDAEIRRLA GKFLREHGHK VTTAQDAREM REAMKAGPVD LIILDIMLPG 
ASGLDLCRDI RRTSSVPIIM LTARGSDVDR IVGLELGADD YLSKPFNPRE LLARIHAVLR
RMRPSGGAAT GGSLLNFAGW TLDTRRRELT NPAAVVVDLS TGEYDLLLTF LEHPQRVLTR
DQLMDAAKNR TATGFDRAID IQVSRLRKKL ESHGGPEMVK TVRGAGYFFV PEVERS