Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1240 |
Symbol | |
ID | 7859551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1403756 |
End bp | 1404439 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643865324 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002881262 |
Protein GI | 229819736 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.729355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGA AGATCCTGGT GGTCGACGAC GACCCTGCGA TCTCCGAGAT GATCGGGATC GTCCTGGAGT CCGACGACTT CGACGCGGTG TTCTGCGACG ACGGCGCCCT CGCCGTCGAG CGGTTCCGCG AGGAGAAGCC GGACCTTGTC CTGCTCGATC TCATGCTTCC GGGCAAGGAC GGGATCGAGG TGTGTCGCGA GATTCGGCGC ACGTCGGGCG TCCCGATCGT CATGCTCACC GCGAAGAGCG ACACGGTCGA CGTCGTCCGC GGGCTCGAGG CCGGTGCCGA CGACTACATC GCGAAGCCGT TCAAGCCGAA GGAGCTCGTG GCGCGCGTGC GCGCGAGGCT GAGGCAGAGC GACGACGGCG AGCAGGAACG CCTGCGGATC GGCGATCTCG TCCTCGACGT CGCGGGCCAT CGCGTGCTGC GCGGGGACGA GACGATCTCG TTGACGCCGC TCGAGTTCGA CCTCGTCGTC GCTCTCGCGC GCAAGCCCTG GCAGGTGTTC ACGCGCGAGG CGCTGCTGGA GCAGGTGTGG GGCTACCGGC ACCAGGCCGA CACGCGCTTG GTCAACGTCC ACGTGCAGCG GCTCCGCGCG AAGGTGGAGA GGGACGCTGA GCACCCCGAG GTCGTCGTGA CCGTGCGCGG GGTCGGGTAC CGCGCCGGGA CGCCCGCGTC GTGA
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Protein sequence | MNAKILVVDD DPAISEMIGI VLESDDFDAV FCDDGALAVE RFREEKPDLV LLDLMLPGKD GIEVCREIRR TSGVPIVMLT AKSDTVDVVR GLEAGADDYI AKPFKPKELV ARVRARLRQS DDGEQERLRI GDLVLDVAGH RVLRGDETIS LTPLEFDLVV ALARKPWQVF TREALLEQVW GYRHQADTRL VNVHVQRLRA KVERDAEHPE VVVTVRGVGY RAGTPAS
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