Gene Bcav_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1240 
Symbol 
ID7859551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1403756 
End bp1404439 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID643865324 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002881262 
Protein GI229819736 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.729355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA AGATCCTGGT GGTCGACGAC GACCCTGCGA TCTCCGAGAT GATCGGGATC 
GTCCTGGAGT CCGACGACTT CGACGCGGTG TTCTGCGACG ACGGCGCCCT CGCCGTCGAG
CGGTTCCGCG AGGAGAAGCC GGACCTTGTC CTGCTCGATC TCATGCTTCC GGGCAAGGAC
GGGATCGAGG TGTGTCGCGA GATTCGGCGC ACGTCGGGCG TCCCGATCGT CATGCTCACC
GCGAAGAGCG ACACGGTCGA CGTCGTCCGC GGGCTCGAGG CCGGTGCCGA CGACTACATC
GCGAAGCCGT TCAAGCCGAA GGAGCTCGTG GCGCGCGTGC GCGCGAGGCT GAGGCAGAGC
GACGACGGCG AGCAGGAACG CCTGCGGATC GGCGATCTCG TCCTCGACGT CGCGGGCCAT
CGCGTGCTGC GCGGGGACGA GACGATCTCG TTGACGCCGC TCGAGTTCGA CCTCGTCGTC
GCTCTCGCGC GCAAGCCCTG GCAGGTGTTC ACGCGCGAGG CGCTGCTGGA GCAGGTGTGG
GGCTACCGGC ACCAGGCCGA CACGCGCTTG GTCAACGTCC ACGTGCAGCG GCTCCGCGCG
AAGGTGGAGA GGGACGCTGA GCACCCCGAG GTCGTCGTGA CCGTGCGCGG GGTCGGGTAC
CGCGCCGGGA CGCCCGCGTC GTGA
 
Protein sequence
MNAKILVVDD DPAISEMIGI VLESDDFDAV FCDDGALAVE RFREEKPDLV LLDLMLPGKD 
GIEVCREIRR TSGVPIVMLT AKSDTVDVVR GLEAGADDYI AKPFKPKELV ARVRARLRQS
DDGEQERLRI GDLVLDVAGH RVLRGDETIS LTPLEFDLVV ALARKPWQVF TREALLEQVW
GYRHQADTRL VNVHVQRLRA KVERDAEHPE VVVTVRGVGY RAGTPAS