| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3978 |
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| Symbol | |
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| ID | 6118328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4848304 |
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| End bp | 4849008 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635540 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001762330 |
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| Protein GI | 170728304 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.832558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCAG AAAAGCATAT TTTGGTGGTC GAAGATGATA TATCGCTGGC TGAGTGGGTT
AGCGATTACT TACTCGATCA TGGCTATCAA GTCACGGTTG CCAGTCAAGG AGACTTTGCC
TTAGAGATGA TTGCTGAGGA GCAGCCCGAT CTTGTTTTGC TCGATGTTAT GTTACCGGTT
AAAAATGGCT TTGATGTATG TAAAGAGGCT CGTGCATTCT ATGCTGGCCC CATTCTATTT
ATGACCGCTT GTGTCGAGGA TGGAGATGAG ATCCAAGGCC TAGAAGTGGG GGCCGACGAT
TATCTCACTA AACCTATTCG CCCAAAAGTT ATGTTAGCTC GTATTAAAGC GTTACTGCGC
CGTGCCATTG ATGACAAACT TAAGCAGCAG CTGGTATTTG AATCTCTTAT CTTAAATGCA
GCTGCTAAGT CTGTCATGGT TGATGATGAG TTGTTAGATC TTAATGCCAA TGAGTTTGAT
GTATTTTGGT TGCTTGCACT GCAAGCGGGA AAAGTGGTTA GTCGTATCGA CTTAGTGTCT
GAGCTTCGTG GTATAGAGTA TGATGGCCTT GACCGCTCGG TTGATATTCG AGTGTCACGA
TTACGTAAAA AATTACAGGA AGCCAAAAGT CAGCCCTATA AAATCAAAAC CATTCGCGGA
AAAGGTTATC TATTTTGTCG CGACGATGAT GAAGCAATGT TATGA
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| Protein sequence | MSAEKHILVV EDDISLAEWV SDYLLDHGYQ VTVASQGDFA LEMIAEEQPD LVLLDVMLPV
KNGFDVCKEA RAFYAGPILF MTACVEDGDE IQGLEVGADD YLTKPIRPKV MLARIKALLR
RAIDDKLKQQ LVFESLILNA AAKSVMVDDE LLDLNANEFD VFWLLALQAG KVVSRIDLVS
ELRGIEYDGL DRSVDIRVSR LRKKLQEAKS QPYKIKTIRG KGYLFCRDDD EAML
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