Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2160 |
Symbol | |
ID | 5206706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2696359 |
End bp | 2697081 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600407 |
Product | two component transcriptional regulator |
Protein accession | YP_001281050 |
Protein GI | 148653957 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC AAATACTCCT GATCGAAGAT GATCCTGATT TAGCAGAATT AATTAGCGAT TACTTGGCAA TGAATTATTA TGAGGTGCAC CATGCGCCCA CAGGTCAAGA AGGTCTTGAT ATTCTTGATG CCAAAGAACG CGCCATCGAC TTAATTATCC TAGACTTAAT GCTACCGGAT ATGGATGGCA TGCAGGTTTG CCAAAAAATC CGTGGCGGTA AAAATAGCCA AACCAATAAA GTGCCTATCG TTATGTTAAC CGCCAAAGGC GATACGACCG ACCGAGTACT GGGTCTGGAG ATGGGCGCAG ACGATTATAT TTCAAAGCCA TTCGAGCCTC GTGAGCTGTT GGCTCGTATT CGTGCCGTAC TGCGTCGTCA TGAGCAGCCA AATCAAGCTG ACAGCCAGTC TGACAGCTTA ACGTTTGGCC GCTTAAGCGT ATTCCCTGAT AGTCATGAAG TCACCATTGA TGACAAGCCT GTCCGTTTAA CCACCCATCA ATTCCAGCTG CTCCACTACT TCGCCACCCA TGCAGGCAAG GTATTAAACC GTGAGCAGTT GTGGCAAGCC ATGCCCAATG ATGACAGCTC AGATAACATT GATCGCGCAA TTGACGTGCA CATCTCAAGA CTGCGTGCAT TAATTGAAGA CAACCCACGT CAGCCTAAAC GCATCATTAC TGTGCGCGGT GTCGGCTATC AATTTGCTAC CGATCAAGTT TAA
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Protein sequence | MSKQILLIED DPDLAELISD YLAMNYYEVH HAPTGQEGLD ILDAKERAID LIILDLMLPD MDGMQVCQKI RGGKNSQTNK VPIVMLTAKG DTTDRVLGLE MGADDYISKP FEPRELLARI RAVLRRHEQP NQADSQSDSL TFGRLSVFPD SHEVTIDDKP VRLTTHQFQL LHYFATHAGK VLNREQLWQA MPNDDSSDNI DRAIDVHISR LRALIEDNPR QPKRIITVRG VGYQFATDQV
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