Gene PsycPRwf_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2160 
Symbol 
ID5206706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2696359 
End bp2697081 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID640600407 
Producttwo component transcriptional regulator 
Protein accessionYP_001281050 
Protein GI148653957 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AAATACTCCT GATCGAAGAT GATCCTGATT TAGCAGAATT AATTAGCGAT 
TACTTGGCAA TGAATTATTA TGAGGTGCAC CATGCGCCCA CAGGTCAAGA AGGTCTTGAT
ATTCTTGATG CCAAAGAACG CGCCATCGAC TTAATTATCC TAGACTTAAT GCTACCGGAT
ATGGATGGCA TGCAGGTTTG CCAAAAAATC CGTGGCGGTA AAAATAGCCA AACCAATAAA
GTGCCTATCG TTATGTTAAC CGCCAAAGGC GATACGACCG ACCGAGTACT GGGTCTGGAG
ATGGGCGCAG ACGATTATAT TTCAAAGCCA TTCGAGCCTC GTGAGCTGTT GGCTCGTATT
CGTGCCGTAC TGCGTCGTCA TGAGCAGCCA AATCAAGCTG ACAGCCAGTC TGACAGCTTA
ACGTTTGGCC GCTTAAGCGT ATTCCCTGAT AGTCATGAAG TCACCATTGA TGACAAGCCT
GTCCGTTTAA CCACCCATCA ATTCCAGCTG CTCCACTACT TCGCCACCCA TGCAGGCAAG
GTATTAAACC GTGAGCAGTT GTGGCAAGCC ATGCCCAATG ATGACAGCTC AGATAACATT
GATCGCGCAA TTGACGTGCA CATCTCAAGA CTGCGTGCAT TAATTGAAGA CAACCCACGT
CAGCCTAAAC GCATCATTAC TGTGCGCGGT GTCGGCTATC AATTTGCTAC CGATCAAGTT
TAA
 
Protein sequence
MSKQILLIED DPDLAELISD YLAMNYYEVH HAPTGQEGLD ILDAKERAID LIILDLMLPD 
MDGMQVCQKI RGGKNSQTNK VPIVMLTAKG DTTDRVLGLE MGADDYISKP FEPRELLARI
RAVLRRHEQP NQADSQSDSL TFGRLSVFPD SHEVTIDDKP VRLTTHQFQL LHYFATHAGK
VLNREQLWQA MPNDDSSDNI DRAIDVHISR LRALIEDNPR QPKRIITVRG VGYQFATDQV