| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2206 |
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| Symbol | |
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| ID | 4923027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2566806 |
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| End bp | 2567546 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163791 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001094331 |
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| Protein GI | 127513134 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.121597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGGATA ATAACTGGAT ACTGATTGTC GATGACGATG CCGATCTGGC AAATCTGGTC
GCCGATTTTC TCGAAATGAA CGGCTATAAA ACCGAGATAG AACACAACGG TGCCAAGGCC
GTCGAGCGCA TCATTGCCGA GCAACCTATG TTGGTTATCT TAGATGTGAT GCTGCCCGAC
ATGGACGGCT TGTCCATCTG CCGCGCGGTG CGTCATGGCC ATCCGGGGAT CGAGGGTAGC
TACAACGGCC CTATCCTGAT GCTGACCGCC CTTAACAACG ATATCGACGA AGTTGCCGGC
CTGGAGACAG GCGCCGACGA CTACCTAGCC AAACCCGTGC GCTCCCGGGT GTTGCTGGCC
AGAGTCCGGG CCCTACTGAG ACGTAAGCCT GAGCCACCTG TCACCGAGAA GCTCAGTAAA
CTGCACAGCA ATAACGAAAG CCTCATCGAA TTTGACGGCC TCAGCATAGA TAAGAAATAT
CAACGTATCC AACAACATGG ACAGGATATC GAACTCACCA CTGCCGAATT TGAGCTGCTG
TGGTTGCTGG CCAGCCGACC CGGCGAGATC TGCGACAGAG ACTCTATCTC TGATTACTTC
AGCGACCTGG GATACGAGAG TTCCCATAGG ACCATAGATC TCAGGGTGTC ACGCATTCGC
CGCAAGCTTG GCGACGATCC CAGCCACGCC ACCCGCATCA AGACGATCCA CGGCAAGGGT
TATCTGTTTG TCGGAGACTG A
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| Protein sequence | MKDNNWILIV DDDADLANLV ADFLEMNGYK TEIEHNGAKA VERIIAEQPM LVILDVMLPD
MDGLSICRAV RHGHPGIEGS YNGPILMLTA LNNDIDEVAG LETGADDYLA KPVRSRVLLA
RVRALLRRKP EPPVTEKLSK LHSNNESLIE FDGLSIDKKY QRIQQHGQDI ELTTAEFELL
WLLASRPGEI CDRDSISDYF SDLGYESSHR TIDLRVSRIR RKLGDDPSHA TRIKTIHGKG
YLFVGD
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