Gene Tpau_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0093 
Symbol 
ID9154227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp98459 
End bp99157 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003645086 
Protein GI296137843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACA TGAACACTGA AAGTGTCCTC GTGATCGAGG ACGAACCTGC CCTCGGACGC 
CTGGTCCGGG ACTACCTGAC CCGCGAAGGC TTCGACGTCA CGGTGGCCAT GGACGGCGAG 
CGCGGGCTAC AGCTCGCCCG CGAACTCGAC CCGGCCGTGA TCATCCTCGA CATCGGTCTG 
CCGCGCATCG ACGGACTCGA GGTGTGCCGC TCACTGCGGC GCTTCTCCGA CGCCTACGTC 
CTCATGCTCA CCGCCCGCGG CGATGAGACC GACAAGATCG TCGGGCTCTC CGTCGGTGCC 
GACGACTACC TGGTCAAACC CTTCAGCCCC CGCGAGGTGG TGGCCCGGGT CCGGGCCATG 
CTGCGCCGTC CGCGTCGCAT GCCTGACGGT GCCGGCACCG ACCGCACGTA CGGCGATCTG 
GCGATCGATC TGCTCGGCCG CGAGGTGCGG ATCGGCGAGA AGGAGATCGA CCTCACCGCC 
ACCGAGTTCG ACGTTCTGGC AGTGCTCGCG CGCAGCCCCA ACGTCGCCTT CTCCCGTAGC 
CAGCTGATCG AGGCGGTCTG GGGTGCCGGC TGGGTCGGCG ACGAGCGCCT GGTGGACGTG 
CACGTCGGCC GCGTGCGGCG CAAGCTCGGC GACGATGCGG GCGATCCCCG CTACGTCCGG 
ACGGTGCGCG GAGTGGGATA CCGAATGGGA CAGGGGTGA
 
Protein sequence
MNDMNTESVL VIEDEPALGR LVRDYLTREG FDVTVAMDGE RGLQLARELD PAVIILDIGL 
PRIDGLEVCR SLRRFSDAYV LMLTARGDET DKIVGLSVGA DDYLVKPFSP REVVARVRAM 
LRRPRRMPDG AGTDRTYGDL AIDLLGREVR IGEKEIDLTA TEFDVLAVLA RSPNVAFSRS 
QLIEAVWGAG WVGDERLVDV HVGRVRRKLG DDAGDPRYVR TVRGVGYRMG QG