More than 300 homologs were found in PanDaTox collection
for query gene Ddes_0573 on replicon NC_011883
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011883  Ddes_0573  binding-protein-dependent transport systems inner membrane component  100 
 
 
277 aa  548  1e-155  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  46.62 
 
 
254 aa  234  1.0000000000000001e-60  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  46.44 
 
 
253 aa  234  1.0000000000000001e-60  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  44.19 
 
 
253 aa  224  1e-57  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  44.57 
 
 
253 aa  222  4.9999999999999996e-57  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  44.19 
 
 
253 aa  220  1.9999999999999999e-56  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  40.29 
 
 
269 aa  207  1e-52  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_008942  Mlab_0377  hypothetical protein  39.41 
 
 
253 aa  181  1e-44  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_0736  binding-protein-dependent transport systems inner membrane component  42.38 
 
 
253 aa  176  4e-43  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.417563  normal  0.341407 
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  36.58 
 
 
264 aa  152  5.9999999999999996e-36  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1031  sulfonate ABC transporter, permease protein  36.9 
 
 
261 aa  148  8e-35  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  38.39 
 
 
288 aa  143  2e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_008553  Mthe_0521  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
239 aa  144  2e-33  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  34.9 
 
 
275 aa  143  3e-33  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2132  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  35.32 
 
 
262 aa  142  4e-33  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  38.69 
 
 
260 aa  142  5e-33  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  36.94 
 
 
269 aa  136  4e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  34.33 
 
 
266 aa  136  5e-31  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_011729  PCC7424_3526  nitrate ABC transporter, inner membrane subunit  34.2 
 
 
280 aa  135  9.999999999999999e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.471487 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  37.66 
 
 
259 aa  132  6e-30  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_009051  Memar_0850  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
258 aa  132  6.999999999999999e-30  Methanoculleus marisnigri JR1  Archaea  hitchhiker  0.00204788  n/a   
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  38.43 
 
 
291 aa  132  6.999999999999999e-30  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  38.43 
 
 
287 aa  132  9e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
252 aa  130  3e-29  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  32.96 
 
 
273 aa  129  4.0000000000000003e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_008554  Sfum_2218  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
290 aa  129  4.0000000000000003e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.484673 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  31.71 
 
 
271 aa  129  5.0000000000000004e-29  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
319 aa  128  8.000000000000001e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
283 aa  128  9.000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_009717  Xaut_5063  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
257 aa  128  1.0000000000000001e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  0.104049  normal  0.0459168 
 
 
-
 
NC_014150  Bmur_1575  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
266 aa  128  1.0000000000000001e-28  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4471  nitrate ABC transporter, inner membrane subunit  33.73 
 
 
297 aa  127  2.0000000000000002e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.5689 
 
 
-
 
NC_013889  TK90_0666  nitrate ABC transporter, inner membrane subunit  32.21 
 
 
311 aa  126  4.0000000000000003e-28  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0569164  decreased coverage  0.0039857 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  38.07 
 
 
274 aa  126  4.0000000000000003e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4879  putative ABC transporter, permease protein  43.23 
 
 
263 aa  126  4.0000000000000003e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.132635 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  38.81 
 
 
274 aa  126  5e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
277 aa  125  7e-28  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_011729  PCC7424_4677  nitrate ABC transporter, inner membrane subunit  32.23 
 
 
279 aa  125  7e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_1026  nitrate transport permease  31.73 
 
 
279 aa  124  1e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.174596 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
285 aa  124  1e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  32.69 
 
 
306 aa  125  1e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
273 aa  124  1e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
255 aa  124  2e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
273 aa  123  3e-27  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
283 aa  123  3e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2953  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
294 aa  123  4e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0086  binding-protein-dependent transport systems inner membrane component  31.92 
 
 
261 aa  122  5e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  33.64 
 
 
273 aa  122  6e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  33.64 
 
 
273 aa  122  6e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_5010  binding-protein-dependent transport systems inner membrane component  37.35 
 
 
260 aa  122  7e-27  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2837  binding-protein dependent transport system inner membrane protein  35.88 
 
 
266 aa  122  7e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.115716  normal 
 
 
-
 
NC_011884  Cyan7425_4571  nitrate ABC transporter, inner membrane subunit  36 
 
 
280 aa  122  8e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_16930  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  34.66 
 
 
322 aa  122  8e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.327  normal  0.410158 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  34.46 
 
 
261 aa  122  8e-27  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
315 aa  121  9.999999999999999e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6460  nitrate ABC transporter, inner membrane subunit  34.55 
 
 
297 aa  121  9.999999999999999e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.150998 
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
280 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_007604  Synpcc7942_1489  nitrate transport permease  31.95 
 
 
278 aa  120  1.9999999999999998e-26  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  29.56 
 
 
283 aa  121  1.9999999999999998e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
254 aa  120  1.9999999999999998e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_011884  Cyan7425_4924  nitrate ABC transporter, inner membrane subunit  31.48 
 
 
280 aa  119  3.9999999999999996e-26  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.815767 
 
 
-
 
NC_011988  Avi_5896  nitrate ABC transporter permease protein  32.58 
 
 
297 aa  119  3.9999999999999996e-26  Agrobacterium vitis S4  Bacteria  normal  0.149001  n/a   
 
 
-
 
NC_007517  Gmet_1900  binding-protein dependent transport system inner membrane protein  35.14 
 
 
252 aa  119  4.9999999999999996e-26  Geobacter metallireducens GS-15  Bacteria  normal  0.128113  hitchhiker  0.000000000000910228 
 
 
-
 
NC_009802  CCC13826_1746  putative molybdenum ABC transporter, solute-binding protein  29.46 
 
 
249 aa  119  4.9999999999999996e-26  Campylobacter concisus 13826  Bacteria  hitchhiker  0.000716411  n/a   
 
 
-
 
NC_010725  Mpop_5011  nitrate ABC transporter, inner membrane subunit  32.58 
 
 
286 aa  119  6e-26  Methylobacterium populi BJ001  Bacteria  normal  0.312092  normal  0.320206 
 
 
-
 
NC_011726  PCC8801_4395  nitrate ABC transporter, inner membrane subunit  34.83 
 
 
277 aa  119  6e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4458  nitrate ABC transporter, inner membrane subunit  34.83 
 
 
277 aa  119  6e-26  Cyanothece sp. PCC 8802  Bacteria  normal  0.698055  normal  0.534513 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  29.67 
 
 
267 aa  119  7e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4495  nitrate ABC transporter, inner membrane subunit  31.84 
 
 
285 aa  119  7.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2503  nitrate ABC transporter, inner membrane subunit  35.64 
 
 
298 aa  118  9e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
278 aa  117  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_014150  Bmur_2553  binding-protein-dependent transport systems inner membrane component  29.12 
 
 
275 aa  118  9.999999999999999e-26  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4958  nitrate ABC transporter, inner membrane subunit  31.84 
 
 
285 aa  118  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.413837  normal  0.165118 
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  33.63 
 
 
256 aa  117  1.9999999999999998e-25  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2055  nitrate transport permease  37.02 
 
 
279 aa  117  1.9999999999999998e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.562067  normal 
 
 
-
 
NC_009483  Gura_3884  binding-protein-dependent transport systems inner membrane component  28.84 
 
 
258 aa  117  1.9999999999999998e-25  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0260  taurine transporter subunit  33.72 
 
 
284 aa  116  3e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3936  taurine transporter subunit  33.72 
 
 
284 aa  116  3e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3693  taurine transporter subunit  33.72 
 
 
284 aa  116  3e-25  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
305 aa  116  3e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  32.95 
 
 
279 aa  117  3e-25  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
277 aa  116  3.9999999999999997e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  33.9 
 
 
273 aa  116  3.9999999999999997e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5414  putative nitrate ABC transporter (permease protein) (ntrB-like protein)  35.68 
 
 
279 aa  116  3.9999999999999997e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481789  normal 
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
273 aa  116  3.9999999999999997e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  30.64 
 
 
279 aa  116  5e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
291 aa  116  5e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
291 aa  116  5e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
266 aa  116  5e-25  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0040  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
259 aa  116  5e-25  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.832577  normal  0.34867 
 
 
-
 
NC_011726  PCC8801_3520  nitrate ABC transporter, inner membrane subunit  30.92 
 
 
280 aa  115  6e-25  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2597  nitrate ABC transporter, inner membrane subunit  30.92 
 
 
280 aa  115  6e-25  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1704  nitrate ABC transporter, inner membrane subunit  29.7 
 
 
311 aa  115  6e-25  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
277 aa  115  6e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_008786  Veis_3642  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
275 aa  115  6.9999999999999995e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.142025  normal 
 
 
-
 
NC_009972  Haur_2337  nitrate ABC transporter, inner membrane subunit  31.28 
 
 
282 aa  115  8.999999999999998e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
295 aa  114  1.0000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2404  nitrate ABC transporter, inner membrane subunit  36.14 
 
 
279 aa  114  1.0000000000000001e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.105129  n/a   
 
 
-
 
NC_008786  Veis_3788  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
276 aa  115  1.0000000000000001e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.374556  normal 
 
 
-
 
NC_013422  Hneap_2205  nitrate ABC transporter, inner membrane subunit  35.18 
 
 
280 aa  114  1.0000000000000001e-24  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
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