Gene Ddes_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0573 
Symbol 
ID7284245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp692560 
End bp693393 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content56% 
IMG OID643581369 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002479161 
Protein GI220903849 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TCAAAGCCTT TATTCTGCCT CTGGTTTTTC CTTTGTTGTT TCTGCTACTG 
TGGCACGTTA TGGCCCATGT GGTAAAGAAT GACATCATTC TGCCTGGCAT TCCGCAGGTA
TGGAGCCTCA TGACCAGCCC GCAGGAAGAC GTGATATCTA TGGGGACCCT GCCCGCCAAC
ACCCTCATAA GCCTGGCGCG CGTTTTTGCA GGCTATTTTA TTGCCGCCGC GCTGGCCGTT
CCCCTGGGAA TTGTCATGGG CTACAAGCCC GGCGTGAACA CGGCGCTCAG CACCTTTCTT
GGCCTGTTCC GGTCCATCCC GCCGCTGGCC TGGGTTCCGC TGGTGCTTGC GTGGTTCGGC
ATGCTCAGCC TGGCCGACGT TTTTTCCGTC CCCATTGGCG CAGCCTATCC ATATTTTCAT
AACATAAAAG TATCCATGAT TTTTATCATC TTCATCGGCG GGTTTTATCC CATCCTGACC
AGCGCCATAC ACGGCGTGGG CATGGTGCCG CAAACGCTTA CCGATGCCGC ACGGGTACTG
GGAGCCGGGC AGATGGACAT TTTCCGCAAG GTGCTGCTGC CTTACGCCGC GCCTTCCATT
GTCAACGGCC TGCGCATCGG CCTCGGGGTA TCGTGGATGT GCCTGGTTTC TGCGGAAATG
CTGCCCGGCA GCCTTTCGGG CGTGGGTTAT CTCATAACGC ATGCCTACAC CGTGGGCAGA
ACCGATGTGG TTATCGCGGG CATGATCAGC ATCGGCGTTG TGGGCGCGCT GCTGGACAGG
CTGTTCAGAT TTTATGAAGA CAGGAAATTT GTATGGAAAC GACTGACCAA ATAG
 
Protein sequence
MKNIKAFILP LVFPLLFLLL WHVMAHVVKN DIILPGIPQV WSLMTSPQED VISMGTLPAN 
TLISLARVFA GYFIAAALAV PLGIVMGYKP GVNTALSTFL GLFRSIPPLA WVPLVLAWFG
MLSLADVFSV PIGAAYPYFH NIKVSMIFII FIGGFYPILT SAIHGVGMVP QTLTDAARVL
GAGQMDIFRK VLLPYAAPSI VNGLRIGLGV SWMCLVSAEM LPGSLSGVGY LITHAYTVGR
TDVVIAGMIS IGVVGALLDR LFRFYEDRKF VWKRLTK