More than 300 homologs were found in PanDaTox collection
for query gene Coch_1628 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_1628  transcriptional regulator, AsnC family  100 
 
 
162 aa  327  4e-89  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2805  transcriptional regulator, AsnC family  46.1 
 
 
158 aa  143  1e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_2132  AsnC family transcriptional regulator  44.97 
 
 
152 aa  135  2e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  0.83383  n/a   
 
 
-
 
NC_013037  Dfer_0204  transcriptional regulator, AsnC family  45.33 
 
 
153 aa  135  3.0000000000000003e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.138221  normal  0.141193 
 
 
-
 
NC_009441  Fjoh_0021  AsnC family transcriptional regulator  42.95 
 
 
152 aa  132  1.9999999999999998e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1520  AsnC family transcriptional regulator  42.28 
 
 
153 aa  128  4.0000000000000003e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4405  transcriptional regulator, AsnC family  41.61 
 
 
153 aa  127  8.000000000000001e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.830471  normal 
 
 
-
 
NC_009441  Fjoh_3837  AsnC family transcriptional regulator  41.5 
 
 
150 aa  126  2.0000000000000002e-28  Flavobacterium johnsoniae UW101  Bacteria  normal  0.261619  n/a   
 
 
-
 
NC_013132  Cpin_0172  transcriptional regulator, AsnC family  39.33 
 
 
172 aa  125  2.0000000000000002e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2901  transcriptional regulator, AsnC family  41.06 
 
 
154 aa  125  2.0000000000000002e-28  Spirosoma linguale DSM 74  Bacteria  normal  0.225499  normal 
 
 
-
 
NC_009524  PsycPRwf_1018  AsnC family transcriptional regulator  40.67 
 
 
162 aa  123  9e-28  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.0000000336802  hitchhiker  0.00248451 
 
 
-
 
NC_007958  RPD_2213  regulatory proteins, AsnC/Lrp  39.73 
 
 
153 aa  122  2e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.214008  normal  0.442221 
 
 
-
 
NC_014230  CA2559_12558  putative AsnC-family transcriptional regulator  39.6 
 
 
153 aa  122  3e-27  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0640143  n/a   
 
 
-
 
NC_013061  Phep_1372  regulatory protein AsnC/Lrp family  39.58 
 
 
155 aa  119  1.9999999999999998e-26  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2234  leucine-responsive transcriptional regulator  39.19 
 
 
167 aa  119  1.9999999999999998e-26  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.0000872232  n/a   
 
 
-
 
NC_007802  Jann_0459  AsnC family transcriptional regulator  37.84 
 
 
160 aa  119  1.9999999999999998e-26  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2299  AsnC family transcriptional regulator  39.33 
 
 
156 aa  119  1.9999999999999998e-26  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00073028 
 
 
-
 
NC_009831  Ssed_2126  leucine-responsive transcriptional regulator  38.51 
 
 
167 aa  118  3e-26  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000250913  normal  0.0385806 
 
 
-
 
NC_008345  Sfri_1794  leucine-responsive transcriptional regulator  38.51 
 
 
165 aa  118  3e-26  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000016537  n/a   
 
 
-
 
NC_009092  Shew_2025  leucine-responsive transcriptional regulator  38.51 
 
 
167 aa  118  3.9999999999999996e-26  Shewanella loihica PV-4  Bacteria  unclonable  0.00000000839293  unclonable  0.00000134482 
 
 
-
 
NC_010506  Swoo_2484  leucine-responsive transcriptional regulator  38.51 
 
 
167 aa  117  4.9999999999999996e-26  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000151917  unclonable  0.000000015798 
 
 
-
 
NC_007492  Pfl01_4939  AsnC family transcriptional regulator  39.33 
 
 
159 aa  117  4.9999999999999996e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2190  leucine-responsive transcriptional regulator  38.51 
 
 
168 aa  117  4.9999999999999996e-26  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000625254  normal  0.0646213 
 
 
-
 
NC_009997  Sbal195_2324  leucine-responsive transcriptional regulator  38.51 
 
 
168 aa  117  4.9999999999999996e-26  Shewanella baltica OS195  Bacteria  hitchhiker  0.000000733571  normal 
 
 
-
 
NC_009052  Sbal_2155  leucine-responsive transcriptional regulator  38.51 
 
 
168 aa  117  4.9999999999999996e-26  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000000584376  n/a   
 
 
-
 
NC_009665  Shew185_2216  leucine-responsive transcriptional regulator  38.51 
 
 
168 aa  117  4.9999999999999996e-26  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000025021  n/a   
 
 
-
 
NC_004347  SO_2305  leucine-responsive transcriptional regulator  38.51 
 
 
168 aa  117  6e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_2829  AsnC family transcriptional regulator  39.73 
 
 
153 aa  117  6e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2012  leucine-responsive transcriptional regulator  38.51 
 
 
168 aa  117  6e-26  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000455922  n/a   
 
 
-
 
NC_008321  Shewmr4_1962  leucine-responsive transcriptional regulator  38.51 
 
 
168 aa  117  6e-26  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000351105  normal  0.663498 
 
 
-
 
NC_008322  Shewmr7_2014  leucine-responsive transcriptional regulator  38.51 
 
 
168 aa  117  6e-26  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000513166  normal  0.0218506 
 
 
-
 
NC_008577  Shewana3_2049  leucine-responsive transcriptional regulator  38.51 
 
 
168 aa  117  6e-26  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000202075  hitchhiker  0.00142974 
 
 
-
 
NC_008709  Ping_3352  transcriptional regulator of AsnC/Lrp family protein  39.86 
 
 
158 aa  117  6e-26  Psychromonas ingrahamii 37  Bacteria  normal  0.868338  normal  0.404848 
 
 
-
 
NC_008255  CHU_3319  AsnC family transcriptional regulator  37.09 
 
 
153 aa  117  7.999999999999999e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0018  transcriptional regulator, AsnC family  39.44 
 
 
156 aa  117  9e-26  Dickeya dadantii Ech703  Bacteria  normal  0.38788  n/a   
 
 
-
 
NC_013132  Cpin_6858  transcriptional regulator, AsnC family  39.04 
 
 
167 aa  116  9.999999999999999e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0811824 
 
 
-
 
NC_007951  Bxe_A4473  AsnC family transcriptional regulator  38.46 
 
 
175 aa  117  9.999999999999999e-26  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000700573 
 
 
-
 
NC_008228  Patl_2217  AsnC family transcriptional regulator  37.33 
 
 
157 aa  116  9.999999999999999e-26  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0872223  n/a   
 
 
-
 
NC_010681  Bphyt_3971  transcriptional regulator, AsnC family  38.46 
 
 
175 aa  116  9.999999999999999e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0019  transcriptional regulator, AsnC family  38.73 
 
 
156 aa  115  1.9999999999999998e-25  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1967  HTH-type transcriptional regulator, AsnC family  37.84 
 
 
155 aa  115  1.9999999999999998e-25  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.100203  n/a   
 
 
-
 
NC_007974  Rmet_4561  AsnC family transcriptional regulator  40.27 
 
 
156 aa  115  1.9999999999999998e-25  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00127893  normal  0.163186 
 
 
-
 
NC_007778  RPB_3252  AsnC family transcriptional regulator  39.04 
 
 
153 aa  115  3e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1742  leucine-responsive transcriptional regulator  37.84 
 
 
166 aa  115  3e-25  Shewanella denitrificans OS217  Bacteria  decreased coverage  0.00000000110042  n/a   
 
 
-
 
NC_007953  Bxe_C1064  AsnC family transcriptional regulator  37.76 
 
 
175 aa  114  5e-25  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4793  transcriptional regulator, AsnC family  39.04 
 
 
159 aa  114  6e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3311  AsnC family transcriptional regulator  35.66 
 
 
175 aa  114  6e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  0.944983  normal  0.0543443 
 
 
-
 
NC_008700  Sama_1771  leucine-responsive transcriptional regulator  37.16 
 
 
167 aa  113  8.999999999999998e-25  Shewanella amazonensis SB2B  Bacteria  unclonable  0.0000000022114  normal  0.0203642 
 
 
-
 
NC_010322  PputGB1_4830  AsnC family transcriptional regulator  39.04 
 
 
158 aa  113  1.0000000000000001e-24  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4776  AsnC family transcriptional regulator  39.04 
 
 
158 aa  113  1.0000000000000001e-24  Pseudomonas putida KT2440  Bacteria  normal  0.524712  hitchhiker  0.00402147 
 
 
-
 
NC_009512  Pput_4652  AsnC family transcriptional regulator  39.04 
 
 
158 aa  113  1.0000000000000001e-24  Pseudomonas putida F1  Bacteria  normal  normal  0.354887 
 
 
-
 
NC_010501  PputW619_0644  AsnC family transcriptional regulator  39.04 
 
 
158 aa  113  1.0000000000000001e-24  Pseudomonas putida W619  Bacteria  normal  0.315347  normal 
 
 
-
 
NC_007650  BTH_II0671  bkd operon transcriptional regulator  36.36 
 
 
229 aa  112  2.0000000000000002e-24  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.0000013017  n/a   
 
 
-
 
NC_010511  M446_5482  AsnC family transcriptional regulator  38.93 
 
 
165 aa  112  2.0000000000000002e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.0784989  normal  0.0295853 
 
 
-
 
NC_012791  Vapar_3966  transcriptional regulator, AsnC family  37.75 
 
 
155 aa  112  2.0000000000000002e-24  Variovorax paradoxus S110  Bacteria  normal  0.716061  n/a   
 
 
-
 
NC_008752  Aave_4188  AsnC family transcriptional regulator  36.77 
 
 
188 aa  112  2.0000000000000002e-24  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2780  AsnC family transcriptional regulator  36 
 
 
155 aa  112  3e-24  Ruegeria sp. TM1040  Bacteria  normal  0.624178  normal 
 
 
-
 
NC_011894  Mnod_1802  transcriptional regulator, AsnC family  39.73 
 
 
166 aa  112  3e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.93685  n/a   
 
 
-
 
NC_007005  Psyr_4335  regulatory proteins, AsnC/Lrp  39.16 
 
 
163 aa  111  4.0000000000000004e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0627745  normal 
 
 
-
 
NC_007204  Psyc_1230  AsnC family transcriptional regulator  35.57 
 
 
162 aa  111  4.0000000000000004e-24  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.261915 
 
 
-
 
NC_012560  Avin_09960  transcriptional regulator, AsnC/Lrp family  37.33 
 
 
159 aa  111  4.0000000000000004e-24  Azotobacter vinelandii DJ  Bacteria  normal  0.130646  n/a   
 
 
-
 
NC_013061  Phep_3139  regulatory protein AsnC/Lrp family  38.69 
 
 
153 aa  111  4.0000000000000004e-24  Pedobacter heparinus DSM 2366  Bacteria  normal  0.91917  normal 
 
 
-
 
NC_010681  Bphyt_2981  transcriptional regulator, AsnC family  36.91 
 
 
162 aa  111  5e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  0.160309  hitchhiker  0.00904587 
 
 
-
 
NC_006349  BMAA1736  bkd operon transcriptional regulator  34.97 
 
 
175 aa  110  6e-24  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.00397839  n/a   
 
 
-
 
NC_008784  BMASAVP1_1635  bkd operon transcriptional regulator  34.97 
 
 
175 aa  110  6e-24  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.00000232797  n/a   
 
 
-
 
NC_012791  Vapar_4765  transcriptional regulator, AsnC family  36.54 
 
 
157 aa  110  6e-24  Variovorax paradoxus S110  Bacteria  normal  0.261527  n/a   
 
 
-
 
NC_009079  BMA10247_A0513  bkd operon transcriptional regulator  34.97 
 
 
175 aa  110  6e-24  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.000000170709  n/a   
 
 
-
 
NC_008835  BMA10229_1843  bkd operon transcriptional regulator  34.97 
 
 
175 aa  110  6e-24  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.00082559  n/a   
 
 
-
 
NC_011206  Lferr_1659  transcriptional regulator, AsnC family  36.49 
 
 
161 aa  110  7.000000000000001e-24  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.31019  normal  0.273663 
 
 
-
 
NC_007794  Saro_1683  AsnC family transcriptional regulator  39.16 
 
 
156 aa  110  7.000000000000001e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_1990  transcriptional regulator, AsnC family  36.49 
 
 
161 aa  110  7.000000000000001e-24  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.141708  n/a   
 
 
-
 
NC_010002  Daci_3118  AsnC family transcriptional regulator  38.62 
 
 
161 aa  110  8.000000000000001e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A0782  bkd operon transcriptional regulator  34.97 
 
 
229 aa  110  8.000000000000001e-24  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.00000164018  n/a   
 
 
-
 
NC_009656  PSPA7_1144  putative transcriptional regulator  38.36 
 
 
159 aa  110  8.000000000000001e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4212  AsnC family transcriptional regulator  35.9 
 
 
157 aa  110  8.000000000000001e-24  Polaromonas sp. JS666  Bacteria  normal  0.642978  normal 
 
 
-
 
NC_010505  Mrad2831_1785  AsnC family transcriptional regulator  38.26 
 
 
171 aa  110  8.000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.121731 
 
 
-
 
NC_009078  BURPS1106A_A2323  AsnC family transcriptional regulator  34.97 
 
 
202 aa  110  9e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_12570  transcription regulator AsnC  38.36 
 
 
169 aa  110  9e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A2461  AsnC family transcriptional regulator  34.97 
 
 
202 aa  110  9e-24  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00000130465  n/a   
 
 
-
 
NC_012912  Dd1591_2140  transcriptional regulator, AsnC family  35.06 
 
 
154 aa  110  1.0000000000000001e-23  Dickeya zeae Ech1591  Bacteria  normal  0.526818  n/a   
 
 
-
 
NC_009379  Pnuc_1553  AsnC family transcriptional regulator  38.46 
 
 
154 aa  109  1.0000000000000001e-23  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.0410589  n/a   
 
 
-
 
NC_009512  Pput_1293  AsnC family transcriptional regulator  36.3 
 
 
164 aa  109  1.0000000000000001e-23  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5229  AsnC family transcriptional regulator  36.24 
 
 
152 aa  109  1.0000000000000001e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.104749  normal 
 
 
-
 
NC_013456  VEA_004016  putative HTH-type transcriptional regulator ybaO  36.18 
 
 
154 aa  110  1.0000000000000001e-23  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3278  AsnC family transcriptional regulator  35.57 
 
 
152 aa  108  2.0000000000000002e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.882377 
 
 
-
 
NC_003910  CPS_4408  proline-responsive regulatory protein  39.6 
 
 
158 aa  108  3e-23  Colwellia psychrerythraea 34H  Bacteria  normal  0.982858  n/a   
 
 
-
 
NC_011080  SNSL254_A0508  glutamate uptake regulatory protein  39.04 
 
 
152 aa  108  3e-23  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.892509 
 
 
-
 
NC_010002  Daci_2497  AsnC family transcriptional regulator  39.16 
 
 
156 aa  108  3e-23  Delftia acidovorans SPH-1  Bacteria  normal  0.38008  normal  0.590435 
 
 
-
 
NC_011205  SeD_A0502  glutamate uptake regulatory protein  39.04 
 
 
152 aa  108  3e-23  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3830  AsnC family transcriptional regulator  35.48 
 
 
158 aa  108  3e-23  Polaromonas sp. JS666  Bacteria  normal  0.676178  normal 
 
 
-
 
NC_009654  Mmwyl1_0235  AsnC family transcriptional regulator  38.41 
 
 
153 aa  108  3e-23  Marinomonas sp. MWYL1  Bacteria  normal  0.141356  normal 
 
 
-
 
NC_007969  Pcryo_1161  AsnC family transcriptional regulator  34.9 
 
 
162 aa  108  3e-23  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.012634 
 
 
-
 
NC_011083  SeHA_C0562  glutamate uptake regulatory protein  39.04 
 
 
152 aa  108  3e-23  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.426244  normal 
 
 
-
 
NC_010627  Bphy_7497  AsnC family transcriptional regulator  34.97 
 
 
169 aa  108  3e-23  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.000799666  normal 
 
 
-
 
NC_011894  Mnod_4898  transcriptional regulator, AsnC family  36.31 
 
 
166 aa  108  3e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.817851  n/a   
 
 
-
 
NC_011149  SeAg_B0499  glutamate uptake regulatory protein  39.04 
 
 
152 aa  108  3e-23  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5150  transcriptional regulator, AsnC family  36.18 
 
 
154 aa  108  3e-23  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2025  AsnC family transcriptional regulator  35.14 
 
 
157 aa  108  3e-23  Marinomonas sp. MWYL1  Bacteria  normal  0.742298  normal 
 
 
-
 
NC_008752  Aave_2309  AsnC family transcriptional regulator  37.76 
 
 
157 aa  108  3e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.00293447 
 
 
-
 
NC_009720  Xaut_0213  AsnC family transcriptional regulator  36.91 
 
 
153 aa  108  3e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.757841 
 
 
-
 
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