Gene PputGB1_4830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4830 
Symbol 
ID5872643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5396393 
End bp5396869 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID641549966 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001671050 
Protein GI167035819 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC TTGACCGTTA CGACCTGAGC ATCCTCGCCG AATTGCAGCG CGATGCGCGC 
ATTTCCAACC AGGAGCTGGC CGAACGCATC GGCCTGTCAC CTTCGCCATG CTCGCGTCGG
GTCAAGCAAC TGGAGGACGA TGGCTACATT TCGCGCCAGG TTGCGCTGCT CGACCGCAAG
AAGCTGGGCC TGAGCCTGAC GGCCTATGTG CTGATCGGCA TGGACCGCCA CACCCCTGAG
CGTTTCGAAA CGTTCGAGGC CGCCATCCGC AACCTGCCGC AGGTGCTGGA ATGCAGCCTG
GTCACCGGCA TGGATGCCGA CTACCAGCTC AAAGTGGTGG TGCCCGACAT GGACCACTAC
CAGAAACTGC TTCTAGGCAG CCTGACCCGT ATCGAAGGCG TCACCAGCGT GCGTTCGAGC
TTCGTGCTCA ACCAGGTACT GGCCAGCACC GAGCTGCCAT TGACCCACCT GCGTTAA
 
Protein sequence
MSKLDRYDLS ILAELQRDAR ISNQELAERI GLSPSPCSRR VKQLEDDGYI SRQVALLDRK 
KLGLSLTAYV LIGMDRHTPE RFETFEAAIR NLPQVLECSL VTGMDADYQL KVVVPDMDHY
QKLLLGSLTR IEGVTSVRSS FVLNQVLAST ELPLTHLR