Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4408 |
Symbol | |
ID | 3519693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4642621 |
End bp | 4643097 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637286849 |
Product | proline-responsive regulatory protein |
Protein accession | YP_271057 |
Protein GI | 71278092 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.982858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATA ACAAAACAAA ACCCTTAGAT CGTATTGATC TTATGATCCT TTCTACTTTG CAGTCAGATG GTAGAATTTC AAATGTGGAT CTAGCCAAAA AAGTAAACCT AAGTGCTAGC CCCTGTTTAG ATCGAGTTAA ACGCTTAGAA ACTGAAGGGT ATATTGAACG TTATGGTGCC TTTTTAAATG CCAGAAAATT AAACTTTGGT ATGAGTGCTT TTGTTCAAGT CACCTTAAGC AGAACAACTT CAGATTCATT CAAACTCTTC AATAAAGAAG TTGTGACTAT TAAAGAAGTT GTTGAGTGTC ATTTAGTGGC AGGTGGATAT GATTACTTGC TGAAAATACG ATTTGCCGAT ATTGAAAGCT ATAGACTGGT GTTAGAAAAT ATTGGCAGAC TGACTAATGT TGCACAAACA AGTACTTACA TAGTAACTGA ACATATAAAG CAAGATGGTG GTATACCGTT CAATTAA
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Protein sequence | MSNNKTKPLD RIDLMILSTL QSDGRISNVD LAKKVNLSAS PCLDRVKRLE TEGYIERYGA FLNARKLNFG MSAFVQVTLS RTTSDSFKLF NKEVVTIKEV VECHLVAGGY DYLLKIRFAD IESYRLVLEN IGRLTNVAQT STYIVTEHIK QDGGIPFN
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