Gene BamMC406_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3311 
Symbol 
ID6181462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp223699 
End bp224226 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID641683083 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001809997 
Protein GI172062346 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.944983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0543443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT CCCCCAAGCG GCTCGACCGC ATCGACATCG GCATCCTGAA CCAGCTTCAG 
CAGAACGCGC GGATCACGAA CGCGGAACTC GCGCGCGCGG TGAACCTGTC GGCCACGCCG
TGCTTCAACC GCGTGCGCGC GCTCGAGAAG CTCGGGCTGT TCCGGCAGCA GGTCACGCTG
CTCGATCCCG AGCCGCTCGG CCTGCGGATC AACGTGTTCA TCCAGGTCAG CCTCGAGAAG
CAGGTCGAGG ACGCGCTGCA GCGCTTCGAG GAGGCGATCT CGCAGCGGCC CGAGGTGATG
GAGTGCTACC TGATGTCGGG CGACGCTGAC TATCTGCTGC GCGTCGTGAT GCCCGACATG
CGTACGCTCG AGCGTTTCAT CATCGAGCGG CTCACGACGA TTCCGGGCGT GTCGAACATC
CGGTCGAGCT TCGCGCTGAA GCAGGTGCGC TACAAGACCG CGCTGCCGTT GCCGGCGGCG
GGGCTCACGC TCGTCGATCC GGACGAGTCC GCGTCCGACT GGAGCTGA
 
Protein sequence
MSTSPKRLDR IDIGILNQLQ QNARITNAEL ARAVNLSATP CFNRVRALEK LGLFRQQVTL 
LDPEPLGLRI NVFIQVSLEK QVEDALQRFE EAISQRPEVM ECYLMSGDAD YLLRVVMPDM
RTLERFIIER LTTIPGVSNI RSSFALKQVR YKTALPLPAA GLTLVDPDES ASDWS