Gene Pfl01_4939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4939 
Symbol 
ID3714022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5565950 
End bp5566429 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content61% 
IMG OID 
ProductAsnC family transcriptional regulator 
Protein accessionYP_350667 
Protein GI77461160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC TCGACCGTTA CGACCTGAGT ATTTTGGCGG AATTGCAGCG CGACGCCCGC 
ATCTCCAACC AGGAACTGGC CGAGCGCATC GGTCTGTCGC CCTCCCCGTG CTCGCGCCGG
GTCAAGCAAC TGGAGGACGA CGGTTACATC TCCCGTCAGG TCGCCCTGCT CGATCGCAAG
ATGCTCGGCC TTAGCCTGAC CGCCTACGTG CTGATCGGCA TGGACCGGCA CACGCCGGAG
CGTTTCGAGA ATTTCGAAGC GGCGATCCGC ACCTTGCCGC AAGTGCTGGA ATGCAGCCTG
GTGACTGGCG TGGATGCCGA CTATCAGCTG AAAGTGGTGG TGCCGGACAT GGATCACTAT
CAGAAGCTGC TGCTGGGGCA TCTGACCCGG ATCGAAGGCG TAACCAGCGT GCGCTCGAGT
TTTGTGCTGA ATCAGGTGCT CAACAGCACC GAACTGCCGC TGACTCATCT GCGCAGCTGA
 
Protein sequence
MSKLDRYDLS ILAELQRDAR ISNQELAERI GLSPSPCSRR VKQLEDDGYI SRQVALLDRK 
MLGLSLTAYV LIGMDRHTPE RFENFEAAIR TLPQVLECSL VTGVDADYQL KVVVPDMDHY
QKLLLGHLTR IEGVTSVRSS FVLNQVLNST ELPLTHLRS