| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2126 |
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| Symbol | |
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| ID | 5610659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2573465 |
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| End bp | 2573968 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640933029 |
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| Product | leucine-responsive transcriptional regulator |
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| Protein accession | YP_001473863 |
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| Protein GI | 157375263 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000250913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0385806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAATA ATAAAAAGAG TCCTATAAAA GACTTAGATC GGATAGATCG AAACATACTT
AATGAGTTAC AAACTGACGG TCGCATTTCC AATGTTGAGC TTTCAAAACG TGTAGGCTTA
AGTCCTACCC CTTGCTTAGA AAGAGTTAAA AGACTTGAAA AACAAGGGTA TATTAATGGA
TATACGGCAT TAGTTAATCC CCATTTCTTG GGTGCATCCT TGCTTGTATT TGTTGAAATT
ACGCTTAATC GTGATAGTTC GGAAGTGTTT GACAAGTTTA ATCGTGCTGT TCAATTACTA
GATGATATTC AAGAGTGTCA TTTAGTATCC GGCGATTTTG ACTACCTGTT GAAAACGCGC
GTATCAGACA TGTCTGCGTA CCGCCGCTTA TTAGGTGAGA CTTTACTTAG ACTGCCTTCT
GTTTCTGACA CACGTACATA CGTTGTGATG GAAGAGGTAA AGCAGACGAG TAAAGTTGCA
ATAAATGTTA CCGCAGAATC TTAA
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| Protein sequence | MVNNKKSPIK DLDRIDRNIL NELQTDGRIS NVELSKRVGL SPTPCLERVK RLEKQGYING
YTALVNPHFL GASLLVFVEI TLNRDSSEVF DKFNRAVQLL DDIQECHLVS GDFDYLLKTR
VSDMSAYRRL LGETLLRLPS VSDTRTYVVM EEVKQTSKVA INVTAES
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