Gene Phep_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1372 
Symbol 
ID8252472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1632672 
End bp1633139 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content43% 
IMG OID644935025 
Productregulatory protein AsnC/Lrp family 
Protein accessionYP_003091648 
Protein GI255531276 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGG GAGACCTCGA CAAAACAGAT ATTGGTATTT TAAGGCTTTT GCAACAGGAC 
GCATTGCTGA GCAATAAGCA ATTGGCACTG GAACTGAACA AATCTACTGC TACCATTCAT
GAAAGGGTAA GGCGGTTAAA AACGGAAGGT TATATCAAAC GCTCGGTAGC CATTCTGGAT
GGCAAAAAGA TTGGCAAAAG CCTGATTGCC TATTCGCAGG TACAGCTAAA AGAACATACC
GACAGTGCTT TGAGCGGCTT TGAAAAAGAG GTGGTAAAAT TTCCGGAAGT GATGGAATGC
TACCACATGA CAGGGGCTTT CGACTTTATT CTCAGGATCG TGATCTCTGA TATGGATGCC
TATCACAATT TTCTGAGGAG CAAACTGGCA CAGCTTAGTA ATATCGGCAC GGTCCAGAGT
TTTTTTGTAA TGTCCGAGAT CAAGACTGAA ACAGCCTATC CCTTTTAA
 
Protein sequence
MNTGDLDKTD IGILRLLQQD ALLSNKQLAL ELNKSTATIH ERVRRLKTEG YIKRSVAILD 
GKKIGKSLIA YSQVQLKEHT DSALSGFEKE VVKFPEVMEC YHMTGAFDFI LRIVISDMDA
YHNFLRSKLA QLSNIGTVQS FFVMSEIKTE TAYPF