Gene RPD_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2213 
Symbol 
ID4022698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2476611 
End bp2477072 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID637962408 
Productregulatory proteins, AsnC/Lrp 
Protein accessionYP_569349 
Protein GI91976690 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.214008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.442221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACC TCGACGCGAT CGACCGCAAA ATCCTCGCCA GCCTGCAGGC CGACGGCCGC 
ACCACCATGC AGGAACTCGC CGACAAGGTC GGATTGTCGG TGTCGCCCTG TCATCGCCGG
GTGAAGCTGC TGGAAAGCCG CGGCGTGATT ACCCGGTACA CCGCGCTGGT CGATCAAAAG
GCGATCGGCC TGCATGTCAG CGTGTTCATC TCGATCAAGC TGGTGCGGCA GAAGGAAGAA
GACCTCAACC GCTTCGCCCG CGCGATCTCG AAATGGGACG AAGTGCTCGA ATGTTATCTG
ATGACCGGCA ACCGCGACTA TCTGCTACGC GTGGTCGCCG CCGACCTCGC CGCCTATGAG
GCGTTCCTGA AGAACAAGCT GACCCGGCTC GACGGCATCG CCTCGATCGA GTCGAGTTTC
GCACTCAGCC AGGTGAAATA CTCGATCGCG CTGCCGGTGT AA
 
Protein sequence
MPDLDAIDRK ILASLQADGR TTMQELADKV GLSVSPCHRR VKLLESRGVI TRYTALVDQK 
AIGLHVSVFI SIKLVRQKEE DLNRFARAIS KWDEVLECYL MTGNRDYLLR VVAADLAAYE
AFLKNKLTRL DGIASIESSF ALSQVKYSIA LPV