Gene Sden_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1742 
Symbol 
ID4018220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp2061290 
End bp2061790 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content44% 
IMG OID637955755 
Productleucine-responsive transcriptional regulator 
Protein accessionYP_562749 
Protein GI91793098 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000000110042 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTATGA AAAATAATCC GCAAAAAGAT CTCGACCGTA TCGATCGCAA TATCCTCAAT 
GAATTACAGC TCGACGGCAG GGTGTCTAAT GTTGAGCTAT CAAAACGTGT CGGTCTAAGC 
CCAACCCCTT GCCTAGAGCG GGTTAAGCGT TTAGAGAAAC AAGGCTTCAT TAAGGGTTAT 
ACCGCGCTGG TCAACCCTAA TTTTCTCGGT GCATCCTTGC TGGTTTTTGT TGAAATAACC 
CTTAATCGAG ATGTCCCTGA TTTATTTGAC AGATTTAACC GCGCGGTGCA ATTACTCGAT 
GATATCCAAG AGTGTTATTT GGTGTCAGGG GATTTTGATT ATTTGCTTAA AACACGGGTG 
TCAGATATGT CAGCCTATCG GCGCCTATTA GGGGAAACCT TAATGAAGTT ACCTTCAGTG 
TCAGATACCC GCACTTACGT GGTGATGGAA GAGGTTAAAC AAAGTACTCG CATTGGCCTA 
AATCATCTTG GAATGGATTG A
 
Protein sequence
MSMKNNPQKD LDRIDRNILN ELQLDGRVSN VELSKRVGLS PTPCLERVKR LEKQGFIKGY 
TALVNPNFLG ASLLVFVEIT LNRDVPDLFD RFNRAVQLLD DIQECYLVSG DFDYLLKTRV 
SDMSAYRRLL GETLMKLPSV SDTRTYVVME EVKQSTRIGL NHLGMD