Gene AFE_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1990 
Symbol 
ID7134819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1746978 
End bp1747463 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID643530363 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002426397 
Protein GI218665971 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.141708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGA AATCCCCTGC CAGCGAATTA GATCGCTACG ACCGCCGCAT TCTGGAGGAA 
CTACAGCGCG ACGGCGGACT CAGCAATCAG CGTCTCGCCG AGCGTATCGC TTTGTCCCCC
TCCCCCTGCC TGCGCCGGGT GCAGGCGTTG GAAGAAGCCG GGATCATCCG CAAGCGTGTG
GCTCTGCTGG ACCCGCAACG TCTGGGCCTG GCGCTGATGG TGCTGATGCA CATCAGCATG
GACCGCCATA CCCCCGAGCG CTTTGAGCAT TTTGAGGCAG AAATCAGCAA CTCGCCGGAG
GTGCTGGAGT GCTACCTCAT CACGGGCCAT GATGCGGATT ACCAGATCAA GGTCGCCGTG
CGCGATATGG CGCATTTCCA GGATTTTCTG CTCCATCGCC TGACACGCAT CGAGGGGGTG
ACCGGCGTGC ATTCCAGCTT TGTGCTGCGC AGGGTGGTGG ATACGACAGA GTTGCCGGTG
TATTGA
 
Protein sequence
MKSKSPASEL DRYDRRILEE LQRDGGLSNQ RLAERIALSP SPCLRRVQAL EEAGIIRKRV 
ALLDPQRLGL ALMVLMHISM DRHTPERFEH FEAEISNSPE VLECYLITGH DADYQIKVAV
RDMAHFQDFL LHRLTRIEGV TGVHSSFVLR RVVDTTELPV Y