Gene Slin_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2901 
Symbol 
ID8726652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3505066 
End bp3505530 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content45% 
IMG OID 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003387713 
Protein GI284037783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.225499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACC TGGATAATAC TGATCGCAAA ATTCTTACCC TGCTTCAGCA GAATGCCCGA 
CTAACGATAC AGGAAATAGG GCAACGAATT AATCTGTCAA AAACACCCGT ACACGAGCGT
ATCAAACGAC TCGAACGGGA GGGTATCATA GAGCGGTACG TAACGATACT TAACAAGAAG
AAACTGGGAA ATTTGTTAAT GGTGTATTGT CAGGTAACCC TGGACCGGCA AACCCGCGAT
GCGTTCGCCG ATTTTGAAGG TGCTATTCGT CTTTTACCCG ATGTATTGGA ATGCAACCGA
GTGTCGGGAA CATTCGATTA TCTGCTTAAA ATCGTAAGCC GCGATATGGA GACGTACAAT
TATTTCTATC AGGAACAGCT ATCGGTCATT CCCGGCACAC TGCATATCAG CAGCTTTTTT
GTCATGGCTG ACGTTAAAAG CTCAACCATT GTTCCGCTGG AGTAA
 
Protein sequence
MENLDNTDRK ILTLLQQNAR LTIQEIGQRI NLSKTPVHER IKRLEREGII ERYVTILNKK 
KLGNLLMVYC QVTLDRQTRD AFADFEGAIR LLPDVLECNR VSGTFDYLLK IVSRDMETYN
YFYQEQLSVI PGTLHISSFF VMADVKSSTI VPLE