Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4188 |
Symbol | |
ID | 4667127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4640018 |
End bp | 4640584 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639825374 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_972502 |
Protein GI | 120612824 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCGT TCCACCCGGA CAAACCCGGG GAGGGCGCCG GCGGGCCGTG CCCGCACACG CGGGGCTTCG TAGAATCCTG TGCCATGAGC GCTTCCCACG CACTGGACCG GCTTGATCGG GCGATCCTGC GCTGCCTTCA GGACAACGGC CGCGAAACCT ACGACGTCAT CGGCGAACAG GTGGGCCTGT CGCCCAGCGC GGTGCTGCGC CGCGCCAAGC GCCTGGAAGA TGCCGGCGTG ATCGACCGCT ACGTCGCCCT GGTGCGTCCG GAGGCCGTGG GCCTGGGCCT CACGGCCTAC CTCAACGTCC GCCTGGAAAA GCACACCGAA AGCCACAAGC GCAACCCCAT GGACCTGTTC CGCGCGAGCG TCCAGACCTG GCCCGAAGTG GTGGAGTGCT CCGCCCTCAC CGGCGAGATG GACTACCTGC TGCGCGTGGT CGTGGCCGAC ATGGCCCACT ACAGCCGGTT CATCATGGAC ACCCTGCTCA AGCACCCCAG CGTGCAGGAC TGCAAGACCA GCTTCGTGCT CGACCGCGTG AAGAGCACCA CCGCGGTGCC CGTCTGA
|
Protein sequence | MAAFHPDKPG EGAGGPCPHT RGFVESCAMS ASHALDRLDR AILRCLQDNG RETYDVIGEQ VGLSPSAVLR RAKRLEDAGV IDRYVALVRP EAVGLGLTAY LNVRLEKHTE SHKRNPMDLF RASVQTWPEV VECSALTGEM DYLLRVVVAD MAHYSRFIMD TLLKHPSVQD CKTSFVLDRV KSTTAVPV
|
| |