Gene CHU_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3319 
Symbol 
ID4186689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3790678 
End bp3791139 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content39% 
IMG OID638073311 
ProductAsnC family transcriptional regulator 
Protein accessionYP_679901 
Protein GI110639691 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACT TAGACGAAAT TGATTTAGAC ATACTGCGTG CCCTTCAGGA AAACGCGCAC 
ATTACAACAA AAGAACTGGC GCATCAGCTG CATTTAACCA CAACACCTAT TTACGAGCGT
GTAAAACGGT TAGAGCGCGA AGGCTATATT AAAAAGTATA TTGCCATACT CGACAATCAG
AAATTGAAAC GCGGCTTAAC GGTATTCTGT AACGTATCGC TGAAGCAGCA TACCAAAGAT
ATCGGTAAAA AATTTGTGGA AGAAATTATT GCCTTACCGG AAATTGTAGA GTGCTATAAT
ATCTCCGGCG AATACGATTT TATGTTAAAG ATTCTGGTAG AAGACATGCC GCACTATCAG
AATTTTGTCA TGAATGGGTT GGGTTCCATA AAAAATATTG GAAGCGCGCA TAGTATTTTT
GTGATTGGCG AGATTAAGCA TTCAACAGCA ATACCGATAT AG
 
Protein sequence
MQHLDEIDLD ILRALQENAH ITTKELAHQL HLTTTPIYER VKRLEREGYI KKYIAILDNQ 
KLKRGLTVFC NVSLKQHTKD IGKKFVEEII ALPEIVECYN ISGEYDFMLK ILVEDMPHYQ
NFVMNGLGSI KNIGSAHSIF VIGEIKHSTA IPI