| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4561 |
|---|
| Symbol | |
|---|
| ID | 4041420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1170793 |
|---|
| End bp | 1171263 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637979980 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_586692 |
|---|
| Protein GI | 94313483 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00127893 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.163186 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAACC CGCTCAAACT CGATGAGATC GATCGTCGCA TCCTGCGCGA GTTGCGCCGC
GACGGCCGTA TCTCCAATGC GAAGCTGGCC GAGCGTGTCG GCCTGTCCGC CACGCCTTGC
TGGAACCGGG TCAAGGCCCT GGAGGACGCT GGCGTAATCA GTGGCTATGC CGCGCTGCTG
AACCAGAAGG CGCTGGGCTT GCCTGATACG GTGCTGATCG AAGTCACGCT CGATCGCCAC
GACGACGAGA TGTTCAATCG CTTCGGCGAG GCGCTGGCGC AGTTGCCTGA AGTGCTGGAG
GCTCATCTGC TGACGGGCGA GTACGACTAC CTGATCAAGG TGGCGGTGGC AGGTACGGAA
GGCTATGAGG AATTCCTGCG CCACAAGCTC TACAAGCTTC CCGGCCTGCG ACACAGCCAC
TCGACTTTCG TGCTGCGCAC GCTGAAGCGC GAGCCGTCGG TCGAACCCTG A
|
|---|
| Protein sequence | MNNPLKLDEI DRRILRELRR DGRISNAKLA ERVGLSATPC WNRVKALEDA GVISGYAALL
NQKALGLPDT VLIEVTLDRH DDEMFNRFGE ALAQLPEVLE AHLLTGEYDY LIKVAVAGTE
GYEEFLRHKL YKLPGLRHSH STFVLRTLKR EPSVEP
|
|---|
| |