Gene Sama_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1771 
Symbol 
ID4604021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2165266 
End bp2165769 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content47% 
IMG OID639781137 
Productleucine-responsive transcriptional regulator 
Protein accessionYP_927646 
Protein GI119774906 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000022114 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0203642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATATA ATAAAAAGAA TCCGGTTAAA GACCTGGATC GCATCGATCG CAATATCCTT 
AATGAACTGC AAATTGATGG AAGAATTTCA AATGTTGAGC TGTCCAAACG GGTAGGGCTG
AGTCCAACCC CTTGTTTGGA AAGGGTTAAA CGCTTAGAAA AGCAAGGGTA TATCAATGGC
TACACCGCCT TGGTAAACCC ACATTACTTG GGCGCCTCGC TGCTGGTTTT TGTTGAGATC
ACCCTGAACC GGGACACACC AGAGGTGTTT GATCGCTTCA ATCGTGCCGT GCAGCTACTG
GACGATATTC AGGAATGTCA CCTGGTTTCC GGTGATTTCG ACTATTTGCT CAAGACCCGC
GTTTCTGACA TGTCTGCCTA CCGTAAGCTC TTGGGCGAAA CCTTGCTGAA ATTGCCTTCT
GTGTCCGACA CCCGTACCTA CGTCGTGATG GAAGAAGTTA AGCAGACCAA TAAGGTCGCG
GTAAACAACA TCTCTGACAA GTAA
 
Protein sequence
MAYNKKNPVK DLDRIDRNIL NELQIDGRIS NVELSKRVGL SPTPCLERVK RLEKQGYING 
YTALVNPHYL GASLLVFVEI TLNRDTPEVF DRFNRAVQLL DDIQECHLVS GDFDYLLKTR
VSDMSAYRKL LGETLLKLPS VSDTRTYVVM EEVKQTNKVA VNNISDK