More than 300 homologs were found in PanDaTox collection
for query gene Acry_1656 on replicon NC_009484
Organism: Acidiphilium cryptum JF-5



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009484  Acry_1656  binding-protein-dependent transport systems inner membrane component  100 
 
 
273 aa  536  1e-151  Acidiphilium cryptum JF-5  Bacteria  normal  0.468113  n/a   
 
 
-
 
NC_009952  Dshi_0549  ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpE  44.62 
 
 
272 aa  249  3e-65  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_3058  binding-protein-dependent transport systems inner membrane component  48.29 
 
 
286 aa  240  2e-62  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2818  binding-protein-dependent transport systems inner membrane component  39.61 
 
 
255 aa  180  2e-44  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0952  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
271 aa  178  8e-44  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
275 aa  169  3e-41  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_012848  Rleg_4942  binding-protein-dependent transport systems inner membrane component  36.76 
 
 
277 aa  169  4e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7358  ABC transporter membrane spanning protein  36.26 
 
 
306 aa  168  1e-40  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
276 aa  165  8e-40  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2116  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
306 aa  164  1.0000000000000001e-39  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
277 aa  164  1.0000000000000001e-39  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_009668  Oant_2942  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
275 aa  160  1e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.667129  n/a   
 
 
-
 
NC_010003  Pmob_0307  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
274 aa  160  2e-38  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1049  binding-protein-dependent transport systems inner membrane component  39.04 
 
 
280 aa  159  3e-38  Paracoccus denitrificans PD1222  Bacteria  normal  0.622209  normal 
 
 
-
 
NC_013521  Sked_03720  carbohydrate ABC transporter membrane protein  34.59 
 
 
298 aa  158  9e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.652933 
 
 
-
 
NC_004311  BRA0306  sugar ABC transporter, permease protein  36.84 
 
 
275 aa  157  2e-37  Brucella suis 1330  Bacteria  normal  0.147324  n/a   
 
 
-
 
NC_010501  PputW619_2039  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
277 aa  157  2e-37  Pseudomonas putida W619  Bacteria  normal  0.830254  normal 
 
 
-
 
NC_013131  Caci_2624  binding-protein-dependent transport systems inner membrane component  37.69 
 
 
282 aa  157  2e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.313327  normal 
 
 
-
 
NC_009654  Mmwyl1_1092  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
276 aa  156  3e-37  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0121396 
 
 
-
 
NC_013525  Tter_0399  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
286 aa  156  4e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_4470  binding-protein-dependent transport systems inner membrane component  34.06 
 
 
277 aa  155  7e-37  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5669  binding-protein-dependent transport systems inner membrane component  35.57 
 
 
275 aa  155  8e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5701  binding-protein-dependent transport systems inner membrane component  38.91 
 
 
278 aa  155  9e-37  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4402  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
288 aa  154  1e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011371  Rleg2_6390  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
303 aa  154  1e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.96233  normal 
 
 
-
 
NC_013521  Sked_02950  carbohydrate ABC transporter membrane protein  34.65 
 
 
297 aa  153  2e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0669  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
283 aa  154  2e-36  Thermotoga sp. RQ2  Bacteria  normal  0.586722  n/a   
 
 
-
 
NC_009636  Smed_2454  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
286 aa  154  2e-36  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
282 aa  153  2e-36  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_007005  Psyr_0760  binding-protein dependent transport system inner membrane protein  36.29 
 
 
280 aa  153  2.9999999999999998e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0312496  normal  0.789995 
 
 
-
 
NC_004578  PSPTO_0887  sugar ABC transporter, permease protein  36.61 
 
 
280 aa  153  4e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.453961  n/a   
 
 
-
 
NC_011899  Hore_03310  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
288 aa  152  4e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2868  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
284 aa  152  8e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
285 aa  152  8e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_013595  Sros_5740  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
289 aa  151  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.872391  normal  0.176709 
 
 
-
 
NC_009486  Tpet_0644  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
283 aa  151  1e-35  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000450076  n/a   
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
279 aa  151  1e-35  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_004578  PSPTO_2705  mannitol ABC transporter, permease protein  31.88 
 
 
277 aa  150  2e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00559467  n/a   
 
 
-
 
NC_007963  Csal_0260  binding-protein-dependent transport systems inner membrane component  37.64 
 
 
280 aa  150  2e-35  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4865  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
296 aa  150  3e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.174421 
 
 
-
 
NC_009620  Smed_3810  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
276 aa  149  6e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3667  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
296 aa  149  7e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2923  putative binding-protein-dependent maltose/mannitol transport protein  32.95 
 
 
277 aa  148  1.0000000000000001e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  0.123543  n/a   
 
 
-
 
NC_008463  PA14_34390  putative binding-protein-dependent maltose/mannitol transport protein  32.95 
 
 
277 aa  148  1.0000000000000001e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.020452  normal  0.455482 
 
 
-
 
NC_011368  Rleg2_4976  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
273 aa  148  1.0000000000000001e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.12262  normal 
 
 
-
 
NC_007005  Psyr_2438  binding-protein dependent transport system inner membrane protein  31.52 
 
 
277 aa  147  2.0000000000000003e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.179424  hitchhiker  0.00104394 
 
 
-
 
NC_012034  Athe_2308  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
283 aa  147  2.0000000000000003e-34  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000390677  n/a   
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
279 aa  147  2.0000000000000003e-34  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1741  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
281 aa  146  4.0000000000000006e-34  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4059  binding-protein-dependent transport systems inner membrane component  35.36 
 
 
281 aa  145  7.0000000000000006e-34  Burkholderia phymatum STM815  Bacteria  normal  0.965906  normal  0.767737 
 
 
-
 
NC_007925  RPC_3644  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
306 aa  144  1e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.433095 
 
 
-
 
NC_012560  Avin_27380  mannitol ABC transporter permease protein  30.69 
 
 
277 aa  145  1e-33  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_7206  binding-protein-dependent transport systems inner membrane component  35.36 
 
 
283 aa  144  1e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0418  ABC sugar transporter, inner membrane subunit  36.74 
 
 
283 aa  144  2e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2890  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
312 aa  143  3e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal  0.323454 
 
 
-
 
NC_009429  Rsph17025_3582  hypothetical protein  32.13 
 
 
278 aa  143  3e-33  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.928396  normal  0.804079 
 
 
-
 
NC_013526  Tter_2490  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
279 aa  143  3e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.961495  n/a   
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
283 aa  143  4e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_007778  RPB_2099  binding-protein dependent transport system inner membrane protein  32.13 
 
 
307 aa  142  4e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.642563  decreased coverage  0.0000998416 
 
 
-
 
NC_007492  Pfl01_2638  binding-protein dependent transport system inner membrane protein  34.06 
 
 
276 aa  142  5e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.269935  normal 
 
 
-
 
NC_008687  Pden_4440  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
277 aa  142  5e-33  Paracoccus denitrificans PD1222  Bacteria  normal  0.062682  normal 
 
 
-
 
NC_009485  BBta_3556  putative ABC transporter permease protein  31.77 
 
 
302 aa  142  8e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3320  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
306 aa  142  8e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.516891  normal 
 
 
-
 
NC_009636  Smed_3402  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
279 aa  142  8e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1884  binding-protein-dependent transporter inner membrane component  34.59 
 
 
278 aa  141  9.999999999999999e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.683331 
 
 
-
 
NC_007948  Bpro_1260  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
291 aa  141  9.999999999999999e-33  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2957  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
275 aa  141  9.999999999999999e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_22980  binding-protein-dependent transport systems inner membrane component  34.66 
 
 
273 aa  141  9.999999999999999e-33  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00970334  n/a   
 
 
-
 
NC_008146  Mmcs_4355  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
289 aa  141  9.999999999999999e-33  Mycobacterium sp. MCS  Bacteria  normal  0.023138  n/a   
 
 
-
 
NC_008254  Meso_3773  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
307 aa  141  9.999999999999999e-33  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2235  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
276 aa  141  9.999999999999999e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4441  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
289 aa  141  9.999999999999999e-33  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0617645 
 
 
-
 
NC_009620  Smed_3589  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
276 aa  141  9.999999999999999e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.577285  normal 
 
 
-
 
NC_009077  Mjls_4735  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
289 aa  141  9.999999999999999e-33  Mycobacterium sp. JLS  Bacteria  normal  0.820737  normal 
 
 
-
 
NC_010465  YPK_2278  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
275 aa  140  1.9999999999999998e-32  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2609  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
272 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.139734  normal 
 
 
-
 
NC_012848  Rleg_5211  binding-protein-dependent transport systems inner membrane component  32.32 
 
 
281 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.610418 
 
 
-
 
NC_010159  YpAngola_A2084  carbohydrate ABC transporter permease  33.58 
 
 
275 aa  140  1.9999999999999998e-32  Yersinia pestis Angola  Bacteria  normal  normal  0.101045 
 
 
-
 
NC_011368  Rleg2_5474  binding-protein-dependent transport systems inner membrane component  32.32 
 
 
280 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.9066  normal  0.435889 
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
283 aa  140  1.9999999999999998e-32  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_009708  YpsIP31758_2170  carbohydrate ABC transporter permease  33.58 
 
 
275 aa  140  1.9999999999999998e-32  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0148377  n/a   
 
 
-
 
NC_011368  Rleg2_5493  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
276 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.173525 
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
277 aa  139  3.9999999999999997e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_19870  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
285 aa  139  4.999999999999999e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4330  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
299 aa  139  4.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0255144 
 
 
-
 
NC_006349  BMAA1075  putative sugar ABC transporter, permease protein  36.67 
 
 
270 aa  139  6e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0067  putative sugar ABC transporter, permease protein  36.67 
 
 
270 aa  139  6e-32  Burkholderia mallei SAVP1  Bacteria  normal  0.864372  n/a   
 
 
-
 
NC_008835  BMA10229_0352  putative sugar ABC transporter, permease protein  36.67 
 
 
270 aa  139  6e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  0.5283  n/a   
 
 
-
 
NC_009079  BMA10247_A1234  putative sugar ABC transporter, permease protein  36.67 
 
 
270 aa  139  6e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  0.139462  n/a   
 
 
-
 
NC_009338  Mflv_3777  binding-protein-dependent transport systems inner membrane component  35.87 
 
 
271 aa  139  6e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.542398  normal  0.498106 
 
 
-
 
NC_008254  Meso_2303  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
275 aa  138  8.999999999999999e-32  Chelativorans sp. BNC1  Bacteria  normal  0.313337  n/a   
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
280 aa  137  1e-31  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_008578  Acel_0554  binding-protein-dependent transport systems inner membrane component  35.83 
 
 
296 aa  138  1e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1881  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
277 aa  138  1e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.31192  normal  0.345507 
 
 
-
 
NC_013093  Amir_0401  binding-protein-dependent transport systems inner membrane component  36.26 
 
 
273 aa  138  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2548  binding-protein dependent transport system inner membrane protein  31.67 
 
 
304 aa  137  2e-31  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00362276  normal 
 
 
-
 
NC_012791  Vapar_3350  binding-protein-dependent transport systems inner membrane component  35.06 
 
 
274 aa  137  2e-31  Variovorax paradoxus S110  Bacteria  normal  0.610127  n/a   
 
 
-
 
NC_013440  Hoch_4323  binding-protein-dependent transport systems inner membrane component  31.08 
 
 
277 aa  137  2e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.296556  normal 
 
 
-
 
NC_013595  Sros_3341  putative sugar ABC transporter, permease protein  30.08 
 
 
292 aa  137  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.22127  normal  0.118781 
 
 
-
 
NC_008786  Veis_2013  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
285 aa  137  2e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.81  normal  0.395958 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>