Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2278 |
Symbol | |
ID | 6087444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2532539 |
End bp | 2533366 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641597340 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001721008 |
Protein GI | 170024503 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATT CTTTGAAGTT TATCTGCCAG AGAACGGGCT TCTATCTCCT GTTGGTGGTG ATCTTGGTGT TTTTTCTGCT GCCGATTTAC TGGTTGGTGA CGATGTCATT TAAAACCTAT ATCGACGCGT TTGCCATGCC ACCCAAGCTG TGGTTTACGC CCATCTTGGA TAATTACCGG CAGGTGCTGG GCAACGGTGA CTTTATTCGT GCATTTGGTA ATAGCCTGCT GATATCGCTG GTCTCGACAT TTCTGTGTTT GATTCTCGGT GCGTTGTTCG CATACGGCCT GGTGTTCTTC ATCGAACGGA AAGGGCGGGC GAAGCAGTTC ATTATGAGCC TGCGTTATGC GCCAGTGATC ATGTTGGTGA TCCCGGTTTA CTACCTAATC ACCAAGCTGG GAATGACGGA CAACTATCTG GTGCTGATCC TGGTGTATAC CGTGGCAAAC GTGCCTTTCA CCATTCTGAT GATCACCACT TTTTTTGAAG ATATTCCACC GGAAATCCGG GAGGCTGCCC GCGTTGATGG GGCCAGTGAG TGGCGCGTGT TCTTAAGCGT AATGTTACCA CTGGCCCGCA CCGGGCTGGC TGCGTCAGGC GTGCTGACAC TGTTCTTTAT CTGGAACGAA TTCCAGATTG TTCTAACGCT CTCTGGTGAT TCCACACAAA CGTTGCCAGT GGCGATCACC TCATTCCTGA CCTTTCAGGG GACAGAGTGG GGCCCACTGA CGGCAGCAGG AACCTTGGTG ATGTTGCCGA TGTTGGTTCT CGGCCTACTG GTACAAAAAC ATCTGGTGCG CGGTTTAACC ATGGGCGGCG TTAAGTAG
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Protein sequence | MSDSLKFICQ RTGFYLLLVV ILVFFLLPIY WLVTMSFKTY IDAFAMPPKL WFTPILDNYR QVLGNGDFIR AFGNSLLISL VSTFLCLILG ALFAYGLVFF IERKGRAKQF IMSLRYAPVI MLVIPVYYLI TKLGMTDNYL VLILVYTVAN VPFTILMITT FFEDIPPEIR EAARVDGASE WRVFLSVMLP LARTGLAASG VLTLFFIWNE FQIVLTLSGD STQTLPVAIT SFLTFQGTEW GPLTAAGTLV MLPMLVLGLL VQKHLVRGLT MGGVK
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