Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0067 |
Symbol | |
ID | 4677494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 61570 |
End bp | 62382 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639842600 |
Product | putative sugar ABC transporter, permease protein |
Protein accession | YP_989684 |
Protein GI | 121596714 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.864372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACGAC TGATCGCACG CGGCGGCACC GTCGCCATCG GCGGCGCGAT CGCGCTCGTC GCCGTGTTTC CGCTCGCGTG GGCGCTCCTC AATTCGTTCA AGCGCCTGCT CGACATCGTC ACGCTGACGC CGCGCTTCAT CTTCACGCCG ACGCTCGACA ACTACCGGCA GGTGCTGTCG AGCCCCGAGG TGCTGATCGG CCTCGGCAAC AGCGTCGCGA TCGTCGGCGT GGCCGTCGCG CTCGGCGCCG CGCTGGGCGT GCCCGCCGCG TACGCGATCG CCCGCTATCC GGTGCGCGGC AAGCGCGACA TCCAGTTCTT CCTGCTGTCG CTGCGCTTCT TGCCGCCCGT CGCGGTCGCG ATTCCGCTGA TCGCGATCTG GGTCGACCTC GGGCTCTACG ACACGAAGCT GTCGATGATC GTCACGTACC TGCTCGTCAC GCTGTCGACA ATCACATGGC TGTCGATCCC CGTGTTCCGC CGGCTGCCGC GCGAAATCGA GGAGGCGGCC GCGCTCGACG GCTACGGGCC GTACGCGGTG TTCTGGCGCG TCGCGCTGCC GGTCTGCGCG AGCACGCTGC TCGGCGGCAT CGTGTTCAGC TTCGTGCTCG TCTGGAACGA ACTGATGATC GCGCTCGCGC TCACGTCGTC GCGCGCGGCG ACGCTGCCCG TCGTCGCGTC CGCGTTCACG TCGCTCGGCC AGGAGGTGCC GTGGGGCGTG ATCAATGCGT CCACCGTGCT GCTCGCGCTG CCGCCGCTCG TCTTCGTCGG CATGCTCAGC CGCCTGCTGA ACTCGATGCT CAAAGGCCGA TAG
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Protein sequence | MGRLIARGGT VAIGGAIALV AVFPLAWALL NSFKRLLDIV TLTPRFIFTP TLDNYRQVLS SPEVLIGLGN SVAIVGVAVA LGAALGVPAA YAIARYPVRG KRDIQFFLLS LRFLPPVAVA IPLIAIWVDL GLYDTKLSMI VTYLLVTLST ITWLSIPVFR RLPREIEEAA ALDGYGPYAV FWRVALPVCA STLLGGIVFS FVLVWNELMI ALALTSSRAA TLPVVASAFT SLGQEVPWGV INASTVLLAL PPLVFVGMLS RLLNSMLKGR
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