| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5701 |
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| Symbol | |
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| ID | 7975754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 415824 |
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| End bp | 416660 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796283 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002947557 |
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| Protein GI | 239820372 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA ATCGAATGGC GTCGCTGCGC CGGCGCTGGC CGCTCGCGCG CTGGGCCGTG
CCGCTCGTCC TGTTCGCGAT GCTGCTGCCG TTCCTGTGGC TGCTGCAGAT GTCGTTCAAG
CCGACGCCGC TGATCCTCGA GTTTCCGCCG CGGGTCTTCT TCATGCCCAC GCTGGAGCAC
TACGTGGGGC TCTGGCAGGC CGGCTTTCCG GAGTCCTTCG CCAACAGCCT GGTCACGAGC
ATCGTGTCGA CGCTGCTCGC GCTGGTGTTC GGCATTCCGG CGGCCTATGC ACTCTCGCGC
TGGACCGGGC GCGGGCGCTT CGGTCTCGGC CTGGGCATCC TGCTGACGCG CATGGCGCCG
CCGATCGCCT TCACGATCCC GTTCTTCCTG GCGTATCGGT ATCTCGGCCT GCTCGACACC
CGCACCGGCC TGATCCTCAT CTACATGACC TTCAACCTGC CGCTGGTGAT CTGGATGATG
CAGCCCTTCT TCGACGCGGT GCCGGCTTCG CTCGAAGAGG CGGCGCTGAT GGACGGCGCG
GGCTACGCCA CCGTGTTCAT GGAGATCGTG ATGCCGATGG CGGCCGCCGG CATCGCGGCC
ACCGCGATCC TGTGCTTTCT CTACGCCTGG AACGACTTCT TCTTCGCGCT GATCCTCACG
CGCACCGATG CGCGCACCGC GCCGGTCGCG GTGGTCAACT TCATGAACTA CGAAGGCTGG
GAGTGGGGCA AGATCGCTGC CGGCGGCTCG CTGGTGATGG CGCCCGTGCT GGTGTTCTCG
ATGCTGGTGC GGCGCTACCT GGTCAGCGGC CTCACGGCCG GCGCGGTGAA GGGCTGA
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| Protein sequence | MSTNRMASLR RRWPLARWAV PLVLFAMLLP FLWLLQMSFK PTPLILEFPP RVFFMPTLEH
YVGLWQAGFP ESFANSLVTS IVSTLLALVF GIPAAYALSR WTGRGRFGLG LGILLTRMAP
PIAFTIPFFL AYRYLGLLDT RTGLILIYMT FNLPLVIWMM QPFFDAVPAS LEEAALMDGA
GYATVFMEIV MPMAAAGIAA TAILCFLYAW NDFFFALILT RTDARTAPVA VVNFMNYEGW
EWGKIAAGGS LVMAPVLVFS MLVRRYLVSG LTAGAVKG
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