Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3402 |
Symbol | |
ID | 5324286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3610228 |
End bp | 3611067 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640792353 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001329058 |
Protein GI | 150398591 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAG CACGCGCCTC CTACATCCGT ATCGGCGCCG TTCACGCGGC ATTGATCGCC TATACGCTCG TCGCCCTGTT TCCGGTCTTC CTGACGATCG CGAATTCGTT CAAGAGCCGC AACGCGATCT TCCGGGAGCC ACTGGCAATC CCGACACCCG AAACCTTCAG CCTGATCGGC TACGAAACGG TGCTGAAACA GGGTGACTTC GTCGGCTATT TCCAGAACAG CATCATCGTC ACCGTGGTCT CGATCGCGCT CGTCCTGCTC TTCGGCGCCA TGGCAGCCTT TGCCCTTTCC GAATACCGCT TCCGCGGCAA TACGCTGATG GGGCTCTATC TCGCGTTGGG CATCATGATC CCGATCCGGC TCGGCACGGT CGCCATCCTT CAGGGCATGG TGGCGGCCGA TCTCGTCAAT ACGCTGACGG CGCTGATCCT CGTCTATACG GCGCAAGGTC TGCCGCTCGC GGTGTTCATC CTGTCGGAGT TCATGCGCAC CGTGTCGGAC GACCTGAAGA ATGCAGGGCG CATCGACGGG TTGTCCGAAT ATGCGATCTT CCTGCGGCTG GTGCTGCCGC TGATCCGACC GGCCATGGCG ACGGTCGCCG TCTTCACCAT GATCCCCATC TGGAACGACC TGTGGTTCCC GCTGATCCTC GCGCCGGCCG AGGCGACCAA GACCGTCACG CTCGGCTCGC AGATCTTCAT CGGCCAGTTC GTCACCAACT GGAACGCAGT TCTCTCGGCA CTGTCGCTGG CGATCTTCCC GGTGCTCGTC CTCTACGTCA TCTTCTCGCG GCAACTGATC CGCGGCATCA CGGCAGGAGC AGTCAAGTGA
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Protein sequence | MSKARASYIR IGAVHAALIA YTLVALFPVF LTIANSFKSR NAIFREPLAI PTPETFSLIG YETVLKQGDF VGYFQNSIIV TVVSIALVLL FGAMAAFALS EYRFRGNTLM GLYLALGIMI PIRLGTVAIL QGMVAADLVN TLTALILVYT AQGLPLAVFI LSEFMRTVSD DLKNAGRIDG LSEYAIFLRL VLPLIRPAMA TVAVFTMIPI WNDLWFPLIL APAEATKTVT LGSQIFIGQF VTNWNAVLSA LSLAIFPVLV LYVIFSRQLI RGITAGAVK
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