Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3810 |
Symbol | |
ID | 5318364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 263028 |
End bp | 263858 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775622 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001312555 |
Protein GI | 150375959 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGTTA CGCTTGTAAA ACGGACCGCG TTCTACGCGC TCGTTGCCGT CATCATCCTG ATTGCCGTCT TTCCATTCTA CTACGCGATC CTGACGAGCT TGAAGTCCGG CACGGCGCTG TTTCGCATCG ACTACTGGCC GACCGATTTC TCGCTCGCGA ACTATGCCGA CATCTTTTCG CACGGCACAT TCGTGCGCAA TCTCGGCAAT TCGCTCCTCG TCGCCACGCT CGTGGTCGCC ATATCGCTCC TTCTCGCCGT TACCGCGGCC TATGCGCTTG CCCGGGTGCG CTTCCGCGGC CGGGGGCTGC TTTTGCTGAC GATCCTGTCC GTTTCCATGT TCCCGCAGAT CGCCGTGCTT GCAGGCCTCT TCGAACTCAT CCGCTTCGTC GGGATCTTCA ACACGCCGCT TGCGCTCATA TTTTCCTACA TGATCTTCAC ACTGCCCTTC ACGGTCTGGG TGCTGACTAC CTTCATGCGG GACCTGCCGA TCGAGATCGA GGAGGCGGCA ATCGTCGACG GCGCTTCTCC CTGGGTGGTG ATCACGCGCG TCTTCATGCC ACTGATGTGG CCGGCGCTGG TGACGACCGG CCTTCTCGCC TTCATTGCGG CGTGGAACGA GTTCCTCTTT GCGCTGACAT TCACGTCGTC CAACACGCAG CGCACCGTGC CGGTTGCGAT TGCGCTGCTC TCCGGGGGCA GCCAGTTCGA GATTCCCTGG GGCAACATCA TGGCAGCGTC CGTGATCGTC ACGGTGCCCC TCGTGGTGCT CGTGCTCATC TTTCAGCGGC GGATCATTTC CGGCCTCACC GCAGGCGGCG TCAAAGGATA G
|
Protein sequence | MVVTLVKRTA FYALVAVIIL IAVFPFYYAI LTSLKSGTAL FRIDYWPTDF SLANYADIFS HGTFVRNLGN SLLVATLVVA ISLLLAVTAA YALARVRFRG RGLLLLTILS VSMFPQIAVL AGLFELIRFV GIFNTPLALI FSYMIFTLPF TVWVLTTFMR DLPIEIEEAA IVDGASPWVV ITRVFMPLMW PALVTTGLLA FIAAWNEFLF ALTFTSSNTQ RTVPVAIALL SGGSQFEIPW GNIMAASVIV TVPLVVLVLI FQRRIISGLT AGGVKG
|
| |