| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3350 |
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| Symbol | |
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| ID | 7970588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3529823 |
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| End bp | 3530647 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644793935 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945234 |
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| Protein GI | 239816324 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.610127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGGC CTTTGCTCCT GGTGGTGGCG CACTACGCGA TGCTTGTTGC GCTGGGCCTG
CTGTGCGTGG CGCCCATTGC GCTGATCTTC ACGACCAGCC TGCGCCAACA GGTGCATATC
TTCGCGGAGC CGCTGAATTT CATCTTCATG CCCACGCTGG AGAACTACCG CGCGGTGCTC
ACTGAAGACA ACCTGGGGCG CTATCTGGGC AACAGTCTGT TCGTCGGCGT GATCGCCACA
GCCATTACCC TGGTGCTGGG CTGCATGGCT GCCTATGGGC TGGCGCGCTT TCGCTTTCCG
GGCCGTTCGG CAGTGGGCTA CACCACTTTG CTGCTGCGTA CCGTGCCTCT GGCCGTGCTC
GCGATTCCGG TGTTCATGAT CTGGAGCCAA TGGCAACTGG TGAACAGCCT GTGGGGACTG
ATCCTTCTGT ACGTCGCGGT GAATCTACCG TTCACCATCT GGCTGCTCTA TGGCTTCGTA
CTGCAGGTGC CGGTCGAACT GGAGGAGGCC GCGGCGATCG ACGGCTGTGG GCCGGTGCGG
GTGTTCACCA AGGTGCTGCT GCCGCTGATG GGGCCGGGTC TCGCGGCGGC GTCCATCTTC
ACCTTCCGCA TCGCGTGGAA CGAATTCATC CTCGCGCTGG TGCTGACCGA CCGGCAGACA
CGCACGCTCC CAGTGGCTGC GTCGCTGTTC ATCACCGACA TGGGCGTGGA TTGGGGCAAG
GTGATGGCGA TGGGCAGCCT GATCGCCATC CCGCCTCTGA TCTTCACCTT CGTAGCAGCG
CGGCAGATCA TCACGGGGAT GACCGCGGGG GCGGTAAAAG GCTGA
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| Protein sequence | MKRPLLLVVA HYAMLVALGL LCVAPIALIF TTSLRQQVHI FAEPLNFIFM PTLENYRAVL
TEDNLGRYLG NSLFVGVIAT AITLVLGCMA AYGLARFRFP GRSAVGYTTL LLRTVPLAVL
AIPVFMIWSQ WQLVNSLWGL ILLYVAVNLP FTIWLLYGFV LQVPVELEEA AAIDGCGPVR
VFTKVLLPLM GPGLAAASIF TFRIAWNEFI LALVLTDRQT RTLPVAASLF ITDMGVDWGK
VMAMGSLIAI PPLIFTFVAA RQIITGMTAG AVKG
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