| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2116 |
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| Symbol | |
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| ID | 3934569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2124470 |
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| End bp | 2125390 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637904472 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_510058 |
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| Protein GI | 89054607 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA CGCAAATCTT CCACGATCAC GAGGCCGATC TTGGCCACAA GGTGAAGTGG
TATGCCAAGC GCGTCACCGT TTACGGCATT TTGTTGCTGT GGGCCTTCAT CTGCCTGTTC
CCGATCTACT GGACGATCAC GACGTCGTTC AAACTGGCCC CGGACGTCAT GCAGGGCAAC
ATGATCCCGT TTGTGGATTA CACGCCGCAA TGGCGCGGGT GGCGGTCCCT TGGCATGTCG
CCCGACACGA TCGGGGAGTA CTCCACCGTC CGGGCCGAGT TTGTGAAACG GTTTCTGAAT
TCCACAATCG TGGCGCTGTC GGCCTCCACG TTGGCGGTGC TTTTGGGCAG CCTGGCCGCC
TACGGCCTCA GCCGGTTCGA GTACCGGTTC GGCTTCATGC GCAACGACGA CATCAGCTTC
TTCTTCCTCA GCCAGCTCAT CCTGCCGCCC GTGGTCCTCG CCCTGCCCTT TTTGGTGCTT
TACCGGGAAA TCGACATGCT CGACAGCCGC ATCGGGCTGA TCCTGCTCTA CACGCTCACC
GTGTTGCCGA TTGTCATCTG GATCATGCGG GACCAGTTCA GTTCGATCCC GATAGAGCTT
GAGGAAGCCG CGCTGGTCGA TGGCCTGTCA ATCTGGGGCG CGTTCCTTAC AATCATCGTC
CCCATCGCGC TGCCGGGAAT GGTTGCGGCC TTTATCCTCA GCCTCGTGCT GACGTGGAAC
GAGTATTTCT TTGCAGCCCT TCTGACATCA ACGGATGCCA CAACACTGCC CGTCATGGTC
GCCAGCCAAA CCGGCAGTCA GGGGATCAAC TGGTGGTCCA TGGCCGCGCT GTCGACAGCC
GCGATCCTGC CGCTGATCGT CATCGGCATC GTGTTGGAAC GCTACATCAT CAAAGGCATG
GCCGCGGGCG CGGTGAAATA A
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| Protein sequence | MSQTQIFHDH EADLGHKVKW YAKRVTVYGI LLLWAFICLF PIYWTITTSF KLAPDVMQGN
MIPFVDYTPQ WRGWRSLGMS PDTIGEYSTV RAEFVKRFLN STIVALSAST LAVLLGSLAA
YGLSRFEYRF GFMRNDDISF FFLSQLILPP VVLALPFLVL YREIDMLDSR IGLILLYTLT
VLPIVIWIMR DQFSSIPIEL EEAALVDGLS IWGAFLTIIV PIALPGMVAA FILSLVLTWN
EYFFAALLTS TDATTLPVMV ASQTGSQGIN WWSMAALSTA AILPLIVIGI VLERYIIKGM
AAGAVK
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