Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2099 |
Symbol | |
ID | 3908513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2386327 |
End bp | 2387250 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637883992 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_485716 |
Protein GI | 86749220 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.642563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000998416 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTGAAA CCACCGCCTC CGACCCGCGC CTCGCGGTCA AGGCCGCGAC CGTCGCCCGG GACGACGACA GCGAGGGCAT GAGCTATCTG GAATCGCTGC CGCGCCGGCT GGTGACGCTG TATTTGCCGC TGTTCATCAT CGTCGTGATC CTGCTGTTCC CGTTCTACTG GATGGCGCTG ACCTCGATCA AACCCGACGA GCAGCTGATC GACATGGACA CCTACAACCC GTTCTGGGTG GTCAAGCCGA CGCTGAAGCA CATTTCCAAG CTGCTGTTCG AGACGCAATA TCCGCGCTGG CTGTGGAACA CGATGTATGT CGCCGCCGCC GCGACGACGT TGTCGATCGT CGCCAGCGTG CTCGCCGCCT ATGCGATCGT GCGGCTGCGG TTCCGCGGCG CCGACAGCGT CGGCGGCGCG ATCTTCCTCG CCTATCTGGT GCCGCCGTCG ATCCTGTTCA TTCCGCTGGC CTCGGTGATC CAGGCCTACG GCCTGTTCGA CTCGCCGCTG TCGCTGATCC TGGTGTATCC GACGCTGCTG ATCCCGTTCT CGACCTGGCT GCTGATGGGC TATTTCAAGA CCATCCCGTT CGAGCTCGAG GAATGCGCGC TGATCGACGG CGCCTCGCGC TGGCAGATCC TCACCAGGAT CATCGTGCCG CTCGCTGTGC CCGGGCTGAT CTCGGCCTTC ATCTTCTCGT TCACGCTGTG CTGGAACGAG TTCATCTACG CGCTGACCTT CCTGCAGTCG ACGCCGAACA AGACCGTGCC GGTGGCGATC GTCAACGAAT TCGTCGACGG CGACATCTAC AAATGGGGCT CGCTGATGGC CGGCGCTCTG GTCGGCTCGC TGCCGCTGGT GATCCTCTAT GCGTTCTTCG TCGAGCACTA TGTGTCGGCG ATGACCGGCG CGGTGAAGGA ATAG
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Protein sequence | MTETTASDPR LAVKAATVAR DDDSEGMSYL ESLPRRLVTL YLPLFIIVVI LLFPFYWMAL TSIKPDEQLI DMDTYNPFWV VKPTLKHISK LLFETQYPRW LWNTMYVAAA ATTLSIVASV LAAYAIVRLR FRGADSVGGA IFLAYLVPPS ILFIPLASVI QAYGLFDSPL SLILVYPTLL IPFSTWLLMG YFKTIPFELE ECALIDGASR WQILTRIIVP LAVPGLISAF IFSFTLCWNE FIYALTFLQS TPNKTVPVAI VNEFVDGDIY KWGSLMAGAL VGSLPLVILY AFFVEHYVSA MTGAVKE
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