Gene Rleg_4865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4865 
Symbol 
ID8007253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp246480 
End bp247370 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content59% 
IMG OID644821795 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973055 
Protein GI241113220 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.174421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG TTGCCGAGAC TGCTCCTCGG GTTAAAGCCC GTCGCCGCAT GCGCATCGAC 
GGATGGCGGT GGGGCGGACG CATCTTCCTC GTTTTCATGA TGCTCTACAC CGCGTTGCCG
ATGATCTGGA TGCTGATCAC CTCGATCAAG TCCGGCTTCG CGGCCATGCA ATTCCCGCCG
CAATGGTGGC CCGACCAACC CACCCTTGCC AGCTACCAGA AACTGCTCGA TCCGCAAAAC
AGCGTCGGCC AGGACTTCCT CCGCTTCTTC TGGAACAGCC TTTTCGTCTC CACCGCCACG
ACCATCCTTT CGGTCATCGT GGCAGTACCT GCGGCCTACG CGTTTTCGCG CTTCACGTTC
CCGGGCCGAA ACTTTCTGTT CTTCGCCGTC TTGCTCCGCA ACATGTTCCC GGCCGTGATC
TTTCTCGTGC CGCTCTTCAT CCTGATGCGC GCGATCGGGC TGGTTAACAC GCATTCGTCA
CTCGTCCTCA CCTACCTCAC ATTTGGCCTG CCGCTGGCAA TCTGGCTCCT CAAGGGCTTT
TACGACAACA TTCCGGTGCA GCTCGAGCAG GCGGCGCGCA TCGACGGCGC GACGCGGTTT
CAGGCCTTTG TCCTGATCGT GATGCCGCTC TCGACGCCAG GAATCATCGC CACGGCGATC
TATTCCTTTA TCGGCGCGTG GAACGAATAC ATCTACGCAT ACACCTTCCT TTCCAAGAAC
GAGCAGTTGA CACTGCCGGT CGGCATCCAG CGCTTCTTCT CGGAAAATAC GACGGACTTT
CCGGGCCTGA TGGCGGCCAG CTTTATGATG AGCGTGCCCG TCGTGGTCCT GTTCCTTGTC
CTGCAACGAT ACTTCGTACG CGCCCTCACG GAAGGCGCAG TCAAGCACTA G
 
Protein sequence
MSTVAETAPR VKARRRMRID GWRWGGRIFL VFMMLYTALP MIWMLITSIK SGFAAMQFPP 
QWWPDQPTLA SYQKLLDPQN SVGQDFLRFF WNSLFVSTAT TILSVIVAVP AAYAFSRFTF
PGRNFLFFAV LLRNMFPAVI FLVPLFILMR AIGLVNTHSS LVLTYLTFGL PLAIWLLKGF
YDNIPVQLEQ AARIDGATRF QAFVLIVMPL STPGIIATAI YSFIGAWNEY IYAYTFLSKN
EQLTLPVGIQ RFFSENTTDF PGLMAASFMM SVPVVVLFLV LQRYFVRALT EGAVKH