Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3320 |
Symbol | |
ID | 4023830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3678818 |
End bp | 3679738 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637963524 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_570445 |
Protein GI | 91977786 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.516891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGA CCACCGCATC CGATCCGCGC CTCGCCAAAT CGCCGACCAT GACCAAGGAC GACGACAGCG AGGGCATGAG CTATCTGGAG TCGCTGCCGC GACGGCTGGT GACGCTGTAT CTGCCGCTGT TCATCATCGT CGTGATCCTG TTGTTCCCGT TTTACTGGAT GGCGCTGACC TCGATCAAAC CCGACGAGCA GCTGATCGAC ATGGAGACCT ACAACCCGTT CTGGGTTGTG AAGCCGACGC TGAAGCACAT CTCGAAGCTG CTGTTCGAGA CGCAATATCC GCGCTGGCTG TGGAACACGA TGTATGTCGC TGCGGCGGCG ACCACGCTGT CGATCGTGGC CAGCGTGCTC GCGGCCTATG CGATCGTGCG GTTGCGATTC CGCGGCGCCG ACAGCGTCGG CGGCGCGATC TTTCTCGCTT ATCTGGTGCC GCCCTCGATC CTGTTTATTC CGCTGGCGTC GGTGATCCAG GCTTACGGCC TGTTCGACTC GCCGCTGTCG TTGATCCTGG TGTATCCGAC GCTGCTGATC CCGTTCTCGA CCTGGCTCTT GATGGGCTAT TTCAAGACCA TCCCGTTCGA GCTCGAGGAA TGCGCACTGA TCGACGGCGC CTCGCGCTGG CAGATCCTCA CCAAGATCAT CGTGCCGCTG GCGGTGCCCG GATTGATCTC GGCCTTTATC TTCTCGTTCA CGCTGTGCTG GAACGAGTTC ATCTACGCGT TGACCTTTCT GCAATCGACG CCGAACAAGA CCGTGCCGGT CGCGATCGTC AACGAATTCG TCGACGGCGA CATTTACAAA TGGGGCTCGC TGATGGCCGG CGCGCTGGTC GGCTCGCTGC CGCTGGTCAT CCTCTACGCA TTCTTCGTCG AGCACTACGT CTCGGCGATG ACGGGTGCCG TCAAGGAATA G
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Protein sequence | MTETTASDPR LAKSPTMTKD DDSEGMSYLE SLPRRLVTLY LPLFIIVVIL LFPFYWMALT SIKPDEQLID METYNPFWVV KPTLKHISKL LFETQYPRWL WNTMYVAAAA TTLSIVASVL AAYAIVRLRF RGADSVGGAI FLAYLVPPSI LFIPLASVIQ AYGLFDSPLS LILVYPTLLI PFSTWLLMGY FKTIPFELEE CALIDGASRW QILTKIIVPL AVPGLISAFI FSFTLCWNEF IYALTFLQST PNKTVPVAIV NEFVDGDIYK WGSLMAGALV GSLPLVILYA FFVEHYVSAM TGAVKE
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