Gene Csal_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0260 
Symbol 
ID4026349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp296940 
End bp297782 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content58% 
IMG OID637965411 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_572323 
Protein GI92112395 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCA GATTCGCCAA GTCTCTTGCC AAGCGTATCG GGTTTTGGTC GTTGATCGCG 
GTGTTGCTGA TTTATGCCGT CTTTCCCTTT TACTACGCGG TGATCACCTC ACTCAAACCT
TCCAGTGCGT TGTTTCAGGT CGAGTATTGG TTGAGCAGCG TGGATTTCAG TAACTACGTC
ACCATCTTTA CCCAAGGCAG TTTCGTCCAG GCGATCATCA ACTCGATCGT CGTTGCCGTC
AGCGTGGTGG CCATTGCCCT GTTGCTGGGC ATCACCGCCG CCTACGCCTT GGGTCGGGTG
CGCTTTCGCG GCCGCACCAC GGTGATGATG ATCGTGCTCG GCGTGTCGAT GTTCCCCCAG
GTCGCGGTGC TCTCGGGGCT GTTCGAGGTG ATCCGTACGC TGAATCTCTA CAACAGTCCG
GGCGGACTGA TCCTGAGTTA CACCATTTTC ACCCTGCCGT TCACCGTCTG GGTATTGACC
ACCTTCATGC GCCAGTTGCC GCAGGAACTG GAGGAGGCGG CGATCATGGA CGGCGCCACC
CCTTGGATCA CCATCACCAA GGTGTTCCTG CCATTGATGT GGCCGGCGAT GGCGACGACG
GGGCTGTTGG CTTTCATCGC TGCCTGGAAC GAGTTCCTCT TCGCTCTCAC GTTCACGCTC
ACCAATGAGG AGCGCACCGT GCCAGTGGCA ATCGCGCTGA TTTCCGGGGG CAGCCAGCAT
GAGTTGCCGT GGGGGCCGAT CATGGCGGCT TCTGTCACTG TCACGGTGCC GTTGGTCATT
CTGGTGATGA TTTTTCAGCG ACGCATCGTC TCGGGTCTCA CCGCCGGTGC CGTCAAGGGC
TGA
 
Protein sequence
MNTRFAKSLA KRIGFWSLIA VLLIYAVFPF YYAVITSLKP SSALFQVEYW LSSVDFSNYV 
TIFTQGSFVQ AIINSIVVAV SVVAIALLLG ITAAYALGRV RFRGRTTVMM IVLGVSMFPQ
VAVLSGLFEV IRTLNLYNSP GGLILSYTIF TLPFTVWVLT TFMRQLPQEL EEAAIMDGAT
PWITITKVFL PLMWPAMATT GLLAFIAAWN EFLFALTFTL TNEERTVPVA IALISGGSQH
ELPWGPIMAA SVTVTVPLVI LVMIFQRRIV SGLTAGAVKG